RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 C17orf82Q86X59 251 aaPredicted RBP18.47■□□□□ 0.55
VPS33A-205ENST00000541169 CILP2Q8IUL8 1156 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 NOA1Q8NC60 698 aaKnown RBP18.47■□□□□ 0.55
VPS33A-205ENST00000541169 CCL4L1Q8NHW4 92 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 FBXO25Q8TCJ0 367 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 PYROXD1Q8WU10 500 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 CAMK1GQ96NX5 476 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 PANX3Q96QZ0 392 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 C20orf96Q9NUD7 363 aaPredicted RBP18.47■□□□□ 0.55
VPS33A-205ENST00000541169 GNPTGQ9UJJ9 305 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 PADI4Q9UM07 663 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 ZFC3H1O60293 1989 aaKnown RBP18.47■□□□□ 0.55
VPS33A-205ENST00000541169 PCNX2A6NKB5 2137 aa18.47■□□□□ 0.55
VPS33A-205ENST00000541169 ARID1BQ8NFD5 2236 aaPredicted RBP18.46■□□□□ 0.55
VPS33A-205ENST00000541169 DCDC2BA2VCK2 349 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 PRR19A6NJB7 356 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 BHMG1C9JSJ3 638 aaPredicted RBP18.46■□□□□ 0.55
VPS33A-205ENST00000541169 CELA2BP08218 269 aaPredicted RBP18.46■□□□□ 0.55
VPS33A-205ENST00000541169 AK4P27144 223 aaPredicted RBP18.46■□□□□ 0.55
VPS33A-205ENST00000541169 HALP42357 657 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 CTSCP53634 463 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 SIM1P81133 766 aaPredicted RBP18.46■□□□□ 0.55
VPS33A-205ENST00000541169 MRPS25P82663 173 aaKnown RBP18.46■□□□□ 0.55
VPS33A-205ENST00000541169 SLC7A5Q01650 507 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 METRNLQ641Q3 311 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 CES3Q6UWW8 571 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 ABRAXAS1Q6UWZ7 409 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 DGLUCYQ7Z3D6 616 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 GALNT7Q86SF2 657 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 IFT20Q8IY31 132 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 ZBED8Q8IZ13 594 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 AGGF1Q8N302 714 aaeCLIP18.46■□□□□ 0.55
VPS33A-205ENST00000541169 HM13Q8TCT9 377 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 SH3KBP1Q96B97 665 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 FCRL3Q96P31 734 aaPredicted RBP18.46■□□□□ 0.55
VPS33A-205ENST00000541169 OSGEPL1Q9H4B0 414 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 EPB41L5Q9HCM4 733 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 SPATS2LQ9NUQ6 558 aaKnown RBP18.46■□□□□ 0.55
VPS33A-205ENST00000541169 KCNK6Q9Y257 313 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 PRKAB1Q9Y478 270 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 COMMD10Q9Y6G5 202 aa18.46■□□□□ 0.55
VPS33A-205ENST00000541169 LIN7AO14910 233 aaPredicted RBP18.45■□□□□ 0.54
VPS33A-205ENST00000541169 SPAG6O75602 509 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 ESR1P03372 595 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 CA5AP35218 305 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 DEKP35659 375 aaKnown RBP18.45■□□□□ 0.54
VPS33A-205ENST00000541169 FASLGP48023 281 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 BIRC2Q13490 618 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 ZNF470Q6ECI4 717 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 IYDQ6PHW0 289 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 DET1Q7L5Y6 550 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 SLC9B2Q86UD5 537 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 KCNMB4Q86W47 210 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 PALM2Q8IXS6 379 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 RBM12BQ8IXT5 1001 aaKnown RBP18.45■□□□□ 0.54
VPS33A-205ENST00000541169 SLC35F3Q8IY50 421 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 SFRP1Q8N474 314 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 EIF1ADQ8N9N8 165 aaKnown RBP18.45■□□□□ 0.54
VPS33A-205ENST00000541169 FBXO36Q8NEA4 188 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 MAPK15Q8TD08 544 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 CERS2Q96G23 380 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 NSMCE4AQ9NXX6 385 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 GULP1Q9UBP9 304 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 CHMP2BQ9UQN3 213 aa18.45■□□□□ 0.54
VPS33A-205ENST00000541169 A6NCN8 305 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 B4DGG1 531 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 SGTAO43765 313 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 NOBOXO60393 691 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 RFPL3O75679 317 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 DKK1O94907 266 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 GPR3P46089 330 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 ACADVLP49748 655 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 HLTFQ14527 1009 aaKnown RBP eCLIP18.44■□□□□ 0.54
VPS33A-205ENST00000541169 PPM1JQ5JR12 505 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 PTRHD1Q6GMV3 140 aaKnown RBP18.44■□□□□ 0.54
VPS33A-205ENST00000541169 UNC5AQ6ZN44 842 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 ERMP1Q7Z2K6 904 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 CNTN4Q8IWV2 1026 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 GSDMBQ8TAX9 411 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 ZFPM2Q8WW38 1151 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.44■□□□□ 0.54
VPS33A-205ENST00000541169 SARS2Q9NP81 518 aaKnown RBP18.44■□□□□ 0.54
VPS33A-205ENST00000541169 MARCH4Q9P2E8 410 aaPredicted RBP18.44■□□□□ 0.54
VPS33A-205ENST00000541169 TBC1D29Q9UFV1 150 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 SLC23A2Q9UGH3 650 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 ST14Q9Y5Y6 855 aa18.44■□□□□ 0.54
VPS33A-205ENST00000541169 CFAP54Q96N23 3096 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 PDZK1P1A8MUH7 402 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 XRCC1P18887 633 aaPredicted RBP18.43■□□□□ 0.54
VPS33A-205ENST00000541169 CD151P48509 253 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 SEMA3AQ14563 771 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 CLPPQ16740 277 aaPredicted RBP18.43■□□□□ 0.54
VPS33A-205ENST00000541169 PLA2G4EQ3MJ16 856 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 ZDHHC24Q6UX98 284 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 RELL1Q8IUW5 271 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 NAGSQ8N159 534 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 CLDN19Q8N6F1 224 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 KYQ8NBH2 561 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 ASZ1Q8WWH4 475 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 LPGAT1Q92604 370 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms