RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 CETN1Q12798 172 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 CHAF1BQ13112 559 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 FBLN7Q53RD9 439 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 YOD1Q5VVQ6 348 aaPredicted RBP4.56□□□□□ -1.68
SNHG1-214ENST00000540865 AFMIDQ63HM1 303 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 CPZQ66K79 652 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 PNCKQ6P2M8 343 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 POMZP3Q6PJE2 187 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 SLC30A9Q6PML9 568 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 CEP128Q6ZU80 1094 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 FAM183BPQ6ZVS7 135 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 RRAGAQ7L523 313 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 SYVN1Q86TM6 617 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 XYLT1Q86Y38 959 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 ZDHHC17Q8IUH5 632 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 PLXDC1Q8IUK5 500 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 SFRP1Q8N474 314 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 WDTC1Q8N5D0 677 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 RBMXL3Q8N7X1 1067 aaKnown RBP4.56□□□□□ -1.68
SNHG1-214ENST00000540865 C1orf131Q8NDD1 294 aaKnown RBP4.56□□□□□ -1.68
SNHG1-214ENST00000540865 ST6GALNAC3Q8NDV1 305 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 LMO3Q8TAP4 145 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 CT55Q8WUE5 264 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 ZNF606Q8WXB4 792 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 SH3KBP1Q96B97 665 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 PTCHD1Q96NR3 888 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 RANBP9Q96S59 729 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 CPXM1Q96SM3 734 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 DNAJC7Q99615 494 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 BARD1Q99728 777 aaKnown RBP4.56□□□□□ -1.68
SNHG1-214ENST00000540865 TEX101Q9BY14 249 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 FRMD8Q9BZ67 464 aaPredicted RBP4.56□□□□□ -1.68
SNHG1-214ENST00000540865 BRD8Q9H0E9 1235 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 ACTL8Q9H568 366 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 PIF1Q9H611 641 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 LHX9Q9NQ69 397 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 PHPT1Q9NRX4 125 aaPredicted RBP4.56□□□□□ -1.68
SNHG1-214ENST00000540865 ASF1BQ9NVP2 202 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 KCTD5Q9NXV2 234 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.56□□□□□ -1.68
SNHG1-214ENST00000540865 LUZP4Q9P127 313 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 ARMCX3Q9UH62 379 aaPredicted RBP4.56□□□□□ -1.68
SNHG1-214ENST00000540865 ITGB1BP2Q9UKP3 347 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 STAP1Q9ULZ2 295 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 SUFUQ9UMX1 484 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 PCDHA7Q9UN72 937 aa4.56□□□□□ -1.68
SNHG1-214ENST00000540865 KLF2Q9Y5W3 355 aaPredicted RBP4.56□□□□□ -1.68
SNHG1-214ENST00000540865 MN1Q10571 1320 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 FADS2P1A8MWK0 482 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 RASA4BC9J798 803 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 TOX3O15405 576 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 INSIG1O15503 277 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 TEX33O43247 280 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 LRRTM2O43300 516 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 RASA4O43374 803 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 BUB1O43683 1085 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 BUB1BO60566 1050 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 ZG16O60844 167 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 RAMP2O60895 175 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 SPAG6O75602 509 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 PIGNO95427 931 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 HPXP02790 462 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 THBDP07204 575 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 SNRPB2P08579 225 aaKnown RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 ELFN1P0C7U0 828 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 FGF5P12034 268 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 KRT5P13647 590 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 JUNBP17275 347 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 GM2AP17900 193 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 TEAD1P28347 426 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 PTPN4P29074 926 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 ME1P48163 572 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 SULT1E1P49888 294 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 SEPHS1P49903 392 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 HDAC4P56524 1084 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 RPS15P62841 145 aaKnown RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 FKBP3Q00688 224 aaKnown RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 HHEXQ03014 270 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 CDK18Q07002 472 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 RALGDSQ12967 914 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 ART3Q13508 389 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 SLC25A52Q3SY17 297 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 PLEKHN1Q494U1 663 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 CRB2Q5IJ48 1285 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 CFAP58Q5T655 872 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 MANEALQ5VSG8 457 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 CYB5D1Q6P9G0 228 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 LIPIQ6XZB0 460 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 LEKR1Q6ZMV7 388 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 NLRP14Q86W24 1093 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 DNAAF5Q86Y56 855 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 CPNE8Q86YQ8 564 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 RASGRP3Q8IV61 690 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 ARHGEF19Q8IW93 802 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 PELI3Q8N2H9 469 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 CISD2Q8N5K1 135 aaKnown RBP4.55□□□□□ -1.68
SNHG1-214ENST00000540865 GLIS1Q8NBF1 620 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 FDCSPQ8NFU4 85 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 SLC37A2Q8TED4 501 aa4.55□□□□□ -1.68
SNHG1-214ENST00000540865 HDAC11Q96DB2 347 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms