RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 TRAF6Q9Y4K3 522 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ARIH1Q9Y4X5 557 aaPredicted RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 IPPQ9Y573 584 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 NRCAMQ92823 1304 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SPTBN5Q9NRC6 3674 aaKnown RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 MAGEB16A2A368 324 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 A8MUA0 341 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 NR5A2O00482 541 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 NME4O00746 187 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 GPR32O75388 356 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 MT-ND1P03886 318 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 PGRP06401 933 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 GPIP06744 558 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SPNP16150 400 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 STMN1P16949 149 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 CCR1P32246 355 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 NPY2RP49146 381 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 RGS4P49798 205 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SEPHS1P49903 392 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 CSRP3P50461 194 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 RAB10P61026 200 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SGCGQ13326 291 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ZNF460Q14592 562 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 UGP2Q16851 508 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ZNF284Q2VY69 593 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 CYBRD1Q53TN4 286 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 AGAP7PQ5VUJ5 663 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 RETSATQ6NUM9 610 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SLC22A15Q8IZD6 547 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 TXNDC5Q8NBS9 432 aaKnown RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 LPCAT1Q8NF37 534 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 DBF4BQ8NFT6 615 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 LILRB4Q8NHJ6 448 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 MAGEE2Q8TD90 523 aaPredicted RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 HCAR2Q8TDS4 363 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 MAP6Q96JE9 813 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 MYRFLQ96LU7 910 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 MCMBPQ9BTE3 642 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ING2Q9H160 280 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 CDT1Q9H211 546 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 NXF3Q9H4D5 531 aaKnown RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 RETREG1Q9H6L5 497 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 CDHR5Q9HBB8 845 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SCUBE2Q9NQ36 999 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 TLR8Q9NR97 1041 aaKnown RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 CACNG4Q9UBN1 327 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 WARS2Q9UGM6 360 aaKnown RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 NDOR1Q9UHB4 597 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SLCO3A1Q9UIG8 710 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ERI2A8K979 691 aaKnown RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 SNPHO15079 494 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ACOX3O15254 700 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 RAMP2O60895 175 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ABCB7O75027 752 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SUPT7LO94864 414 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 PIRTP0C851 137 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 IFI30P13284 250 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 FMO4P31512 558 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ATP4BP51164 291 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 BLVRAP53004 296 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 DNAJB13P59910 316 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 TLE2Q04725 743 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 DUSP4Q13115 394 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 CRHR2Q13324 411 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 BOP1Q14137 746 aaKnown RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 CCL14Q16627 93 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 NDUFA5Q16718 116 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 PKN3Q6P5Z2 889 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SERPINA13PQ6UXR4 307 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ALKAL1Q6UXT8 129 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 TRMT11Q7Z4G4 463 aaKnown RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 CUZD1Q86UP6 607 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ADGRG5Q8IZF4 528 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 LSM14AQ8ND56 463 aaKnown RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 TRPV3Q8NET8 790 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SUSD6Q92537 303 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 CENPIQ92674 756 aaPredicted RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 SH3YL1Q96HL8 342 aaPredicted RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 SMAD5Q99717 465 aaKnown RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 HOPXQ9BPY8 73 aaPredicted RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 MRPL57Q9BQC6 102 aaKnown RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 CCDC90BQ9GZT6 254 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 OSBPL2Q9H1P3 480 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 CHRAC1Q9NRG0 131 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ACTR3BQ9P1U1 418 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 DPP7Q9UHL4 492 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 FZD10Q9ULW2 581 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ORC6Q9Y5N6 252 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SCN10AQ9Y5Y9 1956 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 VCANP13611 3396 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 CLDN5O00501 218 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ARPC2O15144 300 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 HOXC11O43248 304 aaPredicted RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 SSX4O60224 188 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 CYP7B1O75881 506 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 SNAP29O95721 258 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 CRYZL1O95825 349 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 F9P00740 461 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 INHAP05111 366 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ZNF865P0CJ78 1059 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms