RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 OARD1Q9Y530 152 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 INSL6Q9Y581 213 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 TNPO3Q9Y5L0 923 aaKnown RBP13.59□□□□□ -0.23
RTN3-210ENST00000540798 MKI67P46013 3256 aaKnown RBP13.59□□□□□ -0.23
RTN3-210ENST00000540798 SFT2D3Q587I9 215 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 KIAA0907Q7Z7F0 614 aaPredicted RBP13.59□□□□□ -0.23
RTN3-210ENST00000540798 TMEM25Q86YD3 366 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 RNF148Q8N7C7 305 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 GPR26Q8NDV2 337 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 TTC16Q8NEE8 873 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 OR2T11Q8NH01 316 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 UCMAQ8WVF2 138 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 TCEAL4Q96EI5 215 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 SUV39H2Q9H5I1 410 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 ABCD2Q9UBJ2 740 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 NDUFAF1Q9Y375 327 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 TIMM22Q9Y584 194 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 PRORSD1PA6NEY8 169 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 CAPN3P20807 821 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 MSX2P35548 267 aaPredicted RBP13.59□□□□□ -0.23
RTN3-210ENST00000540798 ERVPABLB-1P60509 514 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 BLOC1S3Q6QNY0 202 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 PLPP6Q8IY26 295 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 ZNF641Q96N77 438 aaPredicted RBP13.59□□□□□ -0.23
RTN3-210ENST00000540798 KLHL42Q9P2K6 505 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 PLXNA2O75051 1894 aa13.59□□□□□ -0.23
RTN3-210ENST00000540798 PIKFYVEQ9Y2I7 2098 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 IGLV3-16A0A075B6K0 115 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 WASH3PC4AMC7 463 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 OR7A17O14581 309 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 UGT1A6P19224 532 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 UGT1A1P22309 533 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 UGT1A4P22310 534 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 UGT1A3P35503 534 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 UGT1A5P35504 534 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 MRPS22P82650 360 aaKnown RBP13.58□□□□□ -0.24
RTN3-210ENST00000540798 PTSQ03393 145 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 RBBP7Q16576 425 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 KIF19Q2TAC6 998 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 CARD16Q5EG05 197 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 C6orf10Q5SRN2 563 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 FBXO46Q6PJ61 603 aaPredicted RBP13.58□□□□□ -0.24
RTN3-210ENST00000540798 TICAM1Q8IUC6 712 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 PCYOX1LQ8NBM8 494 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 UBTD2Q8WUN7 234 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 PPP2R3CQ969Q6 453 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 ADA2Q9NZK5 511 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 TAPBPO15533 448 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 FFAR2O15552 330 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 SLC25A14O95258 325 aaPredicted RBP13.58□□□□□ -0.24
RTN3-210ENST00000540798 TCF3P15923 654 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 LHCGRP22888 699 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 DGKAP23743 735 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 ADGRE1Q14246 886 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 SAMD4BQ5PRF9 694 aaKnown RBP13.58□□□□□ -0.24
RTN3-210ENST00000540798 IRAK1BP1Q5VVH5 260 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 RNF165Q6ZSG1 346 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 GOLGA7Q7Z5G4 137 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 MINDY1Q8N5J2 469 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 ZBTB2Q8N680 514 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 OR52B6Q8NGF0 335 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 B4GALNT2Q8NHY0 566 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 EZH1Q92800 747 aaPredicted RBP13.58□□□□□ -0.24
RTN3-210ENST00000540798 ESAMQ96AP7 390 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 HOPXQ9BPY8 73 aaPredicted RBP13.58□□□□□ -0.24
RTN3-210ENST00000540798 ANKRD12Q6UB98 2062 aa13.58□□□□□ -0.24
RTN3-210ENST00000540798 OR4F21O95013 312 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 POP4O95707 220 aaKnown RBP13.57□□□□□ -0.24
RTN3-210ENST00000540798 CHEK2O96017 543 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 RGS4P49798 205 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 DMC1Q14565 340 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 TEAD2Q15562 447 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 ZNF77Q15935 545 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 PDCD4Q53EL6 469 aaKnown RBP13.57□□□□□ -0.24
RTN3-210ENST00000540798 LRRC66Q68CR7 880 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 LETMD1Q6P1Q0 360 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 METTL2BQ6P1Q9 378 aaKnown RBP13.57□□□□□ -0.24
RTN3-210ENST00000540798 USP45Q70EL2 814 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 LILRA2Q8N149 483 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 CLDN19Q8N6F1 224 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 FAM156AQ8NDB6 213 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 RDH14Q9HBH5 336 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 ELOVL2Q9NXB9 296 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 CRLS1Q9UJA2 301 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 SLC25A13Q9UJS0 675 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 FXYD1O00168 92 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 RAD51BO15315 384 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 CRCPO75575 148 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 PIM1P11309 404 aaPredicted RBP13.57□□□□□ -0.24
RTN3-210ENST00000540798 HOXA9P31269 272 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 DIO3P55073 304 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 FOXM1Q08050 763 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 RCAN2Q14206 197 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 TRIP10Q15642 601 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 PRMT9Q6P2P2 845 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 FRA10AC1Q70Z53 315 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 NECAB2Q7Z6G3 386 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 ADIPOR2Q86V24 386 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 MYO1HQ8N1T3 1032 aa13.57□□□□□ -0.24
RTN3-210ENST00000540798 EBF3Q9H4W6 596 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms