RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ACVR1CQ8NER5 493 aa10.48□□□□□ -0.73
ATL3-204ENST00000540699 OR4L1Q8NH43 312 aa10.48□□□□□ -0.73
ATL3-204ENST00000540699 SCAMP4Q969E2 229 aa10.48□□□□□ -0.73
ATL3-204ENST00000540699 FUBP1Q96AE4 644 aaKnown RBP10.48□□□□□ -0.73
ATL3-204ENST00000540699 AP2M1Q96CW1 435 aa10.48□□□□□ -0.73
ATL3-204ENST00000540699 APOPT1Q96IL0 206 aa10.48□□□□□ -0.73
ATL3-204ENST00000540699 PLEKHG4BQ96PX9 1271 aa10.48□□□□□ -0.73
ATL3-204ENST00000540699 APOOQ9BUR5 198 aa10.48□□□□□ -0.73
ATL3-204ENST00000540699 CAPS2Q9BXY5 557 aa10.48□□□□□ -0.73
ATL3-204ENST00000540699 FAM83DQ9H4H8 585 aa10.48□□□□□ -0.73
ATL3-204ENST00000540699 CCDC134Q9H6E4 229 aa10.48□□□□□ -0.73
ATL3-204ENST00000540699 SUDS3Q9H7L9 328 aaPredicted RBP10.48□□□□□ -0.73
ATL3-204ENST00000540699 FAM208BQ5VWN6 2430 aa10.48□□□□□ -0.73
ATL3-204ENST00000540699 FREM2Q5SZK8 3169 aa10.48□□□□□ -0.73
ATL3-204ENST00000540699 PIKFYVEQ9Y2I7 2098 aa10.48□□□□□ -0.73
ATL3-204ENST00000540699 COL5A1P20908 1838 aaPredicted RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 A0A1B0GTQ1 180 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 GOLGA8RI6L899 631 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 GAPDHSO14556 408 aaPredicted RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 TPP1O14773 563 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 STX7O15400 261 aaKnown RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 CD3EAPO15446 510 aaKnown RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 HAUS5O94927 633 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 ASMTLO95671 621 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 S1PR4O95977 384 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 RPA3P35244 121 aaPredicted RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 HADHAP40939 763 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 ETV4P43268 484 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 POLD2P49005 469 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 SERPINB8P50452 374 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 NOVA1P51513 510 aaKnown RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 WDR4P57081 412 aaKnown RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 GABPB1Q06547 395 aaPredicted RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 PTK2BQ14289 1009 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 SHBQ15464 509 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 HLA-BQ31612 363 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 TUBB8Q3ZCM7 444 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 DBX2Q6ZNG2 339 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 CDHR3Q6ZTQ4 885 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 KANSL1Q7Z3B3 1105 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 MINDY1Q8N5J2 469 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 TRAM1L1Q8N609 369 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 GPR26Q8NDV2 337 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 OR6P1Q8NGX9 317 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 GABPB2Q8TAK5 448 aaPredicted RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 COX14Q96I36 57 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 ELF4Q99607 663 aaPredicted RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 ZSCAN5AQ9BUG6 496 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 RIOK2Q9BVS4 552 aaKnown RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 WDR26Q9H7D7 661 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 KCNK9Q9NPC2 374 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 TMEM9BQ9NQ34 198 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 FBXO6Q9NRD1 293 aaPredicted RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 SNX15Q9NRS6 342 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 CATSPERZQ9NTU4 200 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 INTS9Q9NV88 658 aaKnown RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 CD84Q9UIB8 345 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 FKBPLQ9UIM3 349 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 RALYQ9UKM9 306 aaKnown RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 CNOT6Q9ULM6 557 aaKnown RBP10.47□□□□□ -0.73
ATL3-204ENST00000540699 PCDHGB2Q9Y5G2 931 aa10.47□□□□□ -0.73
ATL3-204ENST00000540699 DSPP15924 2871 aaKnown RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 GOLGA8CPA6NN73 597 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 SRRM3A6NNA2 597 aaPredicted RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 FADS2P1A8MWK0 482 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 TNFRSF10CO14798 259 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 GIPC1O14908 333 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 TM9SF1O15321 606 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 YKT6O15498 198 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 PCDHGA12O60330 932 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 ZWINTO95229 277 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 SLC4A1P02730 911 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 DHRS4L1P0CG22 281 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 PRSS56P0CW18 603 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 MYCLP1P12525 358 aaPredicted RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 NME1P15531 152 aaKnown RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 MC4RP32245 332 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 LSP1P33241 339 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 CRHR1P34998 444 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 THOP1P52888 689 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 GNGT1P63211 74 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 CDK3Q00526 305 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 PPARDQ03181 441 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 ILF2Q12905 390 aaKnown RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 EIF2B5Q13144 721 aaKnown RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 SLC14A1Q13336 389 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 PDE1CQ14123 709 aaPredicted RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 TERF2Q15554 542 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 ZKSCAN8Q15776 578 aaPredicted RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 TTC19Q6DKK2 380 aaPredicted RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 RAET1GQ6H3X3 334 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 MRNIPQ6NTE8 343 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 CNSTQ6PJW8 725 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 CMC1Q7Z7K0 106 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 CLEC14AQ86T13 490 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 PARGQ86W56 976 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 HEATR4Q86WZ0 1026 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 PNPLA1Q8N8W4 532 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 ANKRD42Q8N9B4 389 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 OR2I1PQ8NGU4 316 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms