RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 AADATQ8N5Z0 425 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 CDYL2Q8N8U2 506 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 SOCS4Q8WXH5 440 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 ESAMQ96AP7 390 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 AURKBQ96GD4 344 aaPredicted RBP12.14□□□□□ -0.47
NPC1-202ENST00000540608 FUBP3Q96I24 572 aaKnown RBP eCLIP12.14□□□□□ -0.47
NPC1-202ENST00000540608 PPM1MQ96MI6 270 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 GLT1D1Q96MS3 346 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 GPN2Q9H9Y4 310 aaPredicted RBP12.14□□□□□ -0.47
NPC1-202ENST00000540608 HPS4Q9NQG7 708 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 IL37Q9NZH6 218 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 VPS9D1Q9Y2B5 631 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 PLXNA3P51805 1871 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 GBF1Q92538 1859 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 OAZ2O95190 189 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 BCL10O95999 233 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 PKMP14618 531 aaKnown RBP12.14□□□□□ -0.47
NPC1-202ENST00000540608 TCF3P15923 654 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 GGT1P19440 569 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 CRHBPP24387 322 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 ERVPABLB-1P60509 514 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 IL2P60568 153 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 CHRNB3Q05901 458 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 SFSWAPQ12872 951 aaKnown RBP12.14□□□□□ -0.47
NPC1-202ENST00000540608 PWP1Q13610 501 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 SPIDRQ14159 915 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 SELPLGQ14242 412 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 C16orf87Q6PH81 154 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 STK32CQ86UX6 486 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 RAB2BQ8WUD1 216 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 TRUB1Q8WWH5 349 aaKnown RBP12.14□□□□□ -0.47
NPC1-202ENST00000540608 MYEOVQ96EZ4 313 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 RDH12Q96NR8 316 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 CGREF1Q99674 301 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 MGME1Q9BQP7 344 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 TDRD1Q9BXT4 1180 aaKnown RBP12.14□□□□□ -0.47
NPC1-202ENST00000540608 COMMD8Q9NX08 183 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 CD274Q9NZQ7 290 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 MARCH2Q9P0N8 246 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 EIF2B4Q9UI10 523 aaKnown RBP12.14□□□□□ -0.47
NPC1-202ENST00000540608 GNPTGQ9UJJ9 305 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 PSME2Q9UL46 239 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 ASB1Q9Y576 335 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 HTTP42858 3142 aa12.14□□□□□ -0.47
NPC1-202ENST00000540608 SOBPA7XYQ1 873 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 RSL1D1O76021 490 aaKnown RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 IGLV3-27P01718 113 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 HMBSP08397 361 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 CYBAP13498 195 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 GSTM2P28161 218 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 GRK4P32298 578 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 CDKN1CP49918 316 aaPredicted RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 SKIV2LQ15477 1246 aaKnown RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 NFE2Q16621 373 aaPredicted RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 TTC23Q5W5X9 447 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 GTF2IRD2BQ6EKJ0 949 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 GTF2IRD2Q86UP8 949 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 ZNF280BQ86YH2 543 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 SIDT2Q8NBJ9 832 aaKnown RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 MDGA1Q8NFP4 955 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 EEF1AKMT1Q8WVE0 214 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 LHPPQ9H008 270 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 GORASP2Q9H8Y8 452 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 OLA1Q9NTK5 396 aaKnown RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.13□□□□□ -0.47
NPC1-202ENST00000540608 TRMT6Q9UJA5 497 aaKnown RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 ST14Q9Y5Y6 855 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 SLC12A8A0AV02 714 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 C2orf81A6NN90 581 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 C16orf96A6NNT2 1141 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 GMNNO75496 209 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 G6PDP11413 515 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 MTHFRP42898 656 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 MTPNP58546 118 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 SLC44A4Q53GD3 710 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 HABP4Q5JVS0 413 aaKnown RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 FAM43BQ6ZT52 329 aaPredicted RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 FKBP9P1Q75LS8 142 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 GLT6D1Q7Z4J2 308 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 R3HCC1LQ7Z5L2 792 aaKnown RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 ZDHHC13Q8IUH4 622 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 C8orf59Q8N0T1 100 aaPredicted RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 ZBTB8BQ8NAP8 495 aaPredicted RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 OR52B6Q8NGF0 335 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 OR8J3Q8NGG0 315 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 HDAC2Q92769 488 aaKnown RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 LINGO1Q96FE5 620 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 MAGED4Q96JG8 741 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 CDK15Q96Q40 435 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 UGT2B28Q9BY64 529 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 ACTL8Q9H568 366 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 SMPD4Q9NXE4 827 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 COQ6Q9Y2Z9 468 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 MAGED1Q9Y5V3 778 aaPredicted RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 FAM92AA1XBS5 289 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 G3V2T6 193 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 NIPSNAP2O75323 286 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 OCM2P0CE71 109 aa12.13□□□□□ -0.47
NPC1-202ENST00000540608 OCMP0CE72 109 aaPredicted RBP12.13□□□□□ -0.47
NPC1-202ENST00000540608 PCNAP12004 261 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms