RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 TMEM248Q9NWD8 314 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 SMPD3Q9NY59 655 aaPredicted RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 ZDHHC2Q9UIJ5 367 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 BTBD3Q9Y2F9 522 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 TNPO3Q9Y5L0 923 aaKnown RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 OR51F1A6NGY5 319 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 G3V2T6 193 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 ACSL4O60488 711 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 ATP6V1G1O75348 118 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 ALDH1A2O94788 518 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 CLIC3O95833 236 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 MTHFD1P11586 935 aaKnown RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 COL6A2P12110 1019 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 ATF6P18850 670 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 CRATP43155 626 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 RPS9P46781 194 aaKnown RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 RPS7P62081 194 aaKnown RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 CNTN1Q12860 1018 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 MTA1Q13330 715 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 CAMK2GQ13555 558 aaPredicted RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 C1DQ13901 141 aaKnown RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 CEP78Q5JTW2 689 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 ARMC12Q5T9G4 340 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 TPGS1Q6ZTW0 290 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 CYS1Q717R9 158 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 OTOP2Q7RTS6 562 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 ZNF554Q86TJ5 538 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 PLD6Q8N2A8 252 aaKnown RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 ZNF461Q8TAF7 563 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 PNPT1Q8TCS8 783 aaKnown RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 SKA1Q96BD8 255 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 PAWRQ96IZ0 340 aaKnown RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 PLAC1Q9HBJ0 212 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 PCDH12Q9NPG4 1184 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 MRPL17Q9NRX2 175 aaKnown RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 EHD3Q9NZN3 535 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 KLHL3Q9UH77 587 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 CLCA2Q9UQC9 943 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 PIPSLA2A3N6 862 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 E7ENX8 843 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 EI24O14681 340 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 EPN2O95208 641 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 GJB5O95377 273 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 OAS1P00973 400 aaKnown RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 CES1P23141 567 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 MTHFRP42898 656 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 BCL2L1Q07817 233 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 NIPAL4Q0D2K0 466 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 KRR1Q13601 381 aaKnown RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 PARP15Q460N3 678 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 PDZK1Q5T2W1 519 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 MANEALQ5VSG8 457 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 ANKRD33Q7Z3H0 272 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 UMODL1-AS1Q8N2C9 162 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 MRPS31Q92665 395 aaKnown RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 PANX1Q96RD7 426 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 TIMMDC1Q9NPL8 285 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 PIP5K1BO14986 540 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 SOD2P04179 222 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 CSF2RAP15509 400 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 CORO1AP31146 461 aaKnown RBP9.87□□□□□ -0.83
TRAF1-202ENST00000540010 ACVRL1P37023 503 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 HPCAP84074 193 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 EPS8Q12929 822 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 ZNF284Q2VY69 593 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 KLHDC10Q6PID8 442 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 GPR180Q86V85 440 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 CACUL1Q86Y37 369 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 AMER2Q8N7J2 671 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 C19orf18Q8NEA5 215 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 TMEM159Q96B96 161 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 ZNF778Q96MU6 729 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 GPR21Q99679 349 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 ADPRHL2Q9NX46 363 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 FNIP2Q9P278 1114 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 YIPF1Q9Y548 306 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 ZFP37Q9Y6Q3 630 aaPredicted RBP9.87□□□□□ -0.83
TRAF1-202ENST00000540010 MYO10Q9HD67 2058 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 TFECO14948 347 aaPredicted RBP9.87□□□□□ -0.83
TRAF1-202ENST00000540010 RNASEH1O60930 286 aaKnown RBP9.87□□□□□ -0.83
TRAF1-202ENST00000540010 ANXA5P08758 320 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 LAG3P18627 525 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 AOC1P19801 751 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 HOXC13P31276 330 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 GGT5P36269 586 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 RPS24P62847 133 aaKnown RBP9.87□□□□□ -0.83
TRAF1-202ENST00000540010 INO80DQ53TQ3 878 aaPredicted RBP9.87□□□□□ -0.83
TRAF1-202ENST00000540010 KCTD11Q693B1 232 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 TRMT11Q7Z4G4 463 aaKnown RBP9.87□□□□□ -0.83
TRAF1-202ENST00000540010 TMEM135Q86UB9 458 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 GPR156Q8NFN8 814 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 FBXO27Q8NI29 283 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 ABHD8Q96I13 439 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 TOX2Q96NM4 488 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 FANCEQ9HB96 536 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 COPG1Q9Y678 874 aaKnown RBP9.87□□□□□ -0.83
TRAF1-202ENST00000540010 ABHD14A-ACY1A0A1B0GW23 586 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 NPEPPSL1A6NEC2 478 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 ZBTB14O43829 449 aa9.87□□□□□ -0.83
TRAF1-202ENST00000540010 CXCL10P02778 98 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms