RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 A0A087WUV0 522 aaPredicted RBP12.79□□□□□ -0.36
CCDC42-202ENST00000539522 IQCF5A8MTL0 148 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 AQP9O43315 295 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 SPAG6O75602 509 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 ACSL3O95573 720 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 ATP1B2P14415 290 aaPredicted RBP12.79□□□□□ -0.36
CCDC42-202ENST00000539522 PRLHRP49683 370 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 HNRNPKP61978 463 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC42-202ENST00000539522 IFFO1Q0D2I5 559 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 ITIH4Q14624 930 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 FASTKD1Q53R41 847 aaKnown RBP12.79□□□□□ -0.36
CCDC42-202ENST00000539522 ZNF470Q6ECI4 717 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 TMEM220Q6QAJ8 160 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 CAPN12Q6ZSI9 719 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 CHST15Q7LFX5 561 aaPredicted RBP12.79□□□□□ -0.36
CCDC42-202ENST00000539522 KCNMB4Q86W47 210 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 C2CD4AQ8NCU7 369 aaPredicted RBP12.79□□□□□ -0.36
CCDC42-202ENST00000539522 ACVR1CQ8NER5 493 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 GDAP1Q8TB36 358 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 LMX1AQ8TE12 382 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 FAM122AQ96E09 287 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 RMI1Q9H9A7 625 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 FBXO6Q9NRD1 293 aaPredicted RBP12.79□□□□□ -0.36
CCDC42-202ENST00000539522 IARS2Q9NSE4 1012 aaKnown RBP12.79□□□□□ -0.36
CCDC42-202ENST00000539522 TRNAU1APQ9NX07 287 aaKnown RBP12.79□□□□□ -0.36
CCDC42-202ENST00000539522 FAM53CQ9NYF3 392 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 ZNHIT2Q9UHR6 403 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 MOSPD1Q9UJG1 213 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 KCNK6Q9Y257 313 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 GPSM3Q9Y4H4 160 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 CEP250Q9BV73 2442 aa12.79□□□□□ -0.36
CCDC42-202ENST00000539522 TCRBV9S1A1TA0A576 114 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 GPR89AB7ZAQ6 455 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 LMO7DNF2Z398 122 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 AGPSO00116 658 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 FFAR2O15552 330 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 SH3BP5O60239 455 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 DFNA5O60443 496 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 TCEA3O75764 348 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 POP7O75817 140 aaKnown RBP12.78□□□□□ -0.36
CCDC42-202ENST00000539522 HAUS5O94927 633 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 GPR89BP0CG08 455 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 ACP5P13686 325 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 BRAFP15056 766 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 MSH3P20585 1137 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 OGNP20774 298 aaKnown RBP12.78□□□□□ -0.36
CCDC42-202ENST00000539522 AKT1P31749 480 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 ABCG1P45844 678 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 ARRB1P49407 418 aaPredicted RBP12.78□□□□□ -0.36
CCDC42-202ENST00000539522 PGGT1BP53609 377 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 EFTUD2Q15029 972 aaKnown RBP eCLIP12.78□□□□□ -0.36
CCDC42-202ENST00000539522 DEFB133Q30KQ1 61 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 UAP1L1Q3KQV9 507 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 HSP90B2PQ58FF3 399 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 CNSTQ6PJW8 725 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 NAPRTQ6XQN6 538 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 CERS6Q6ZMG9 384 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 CYS1Q717R9 158 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 LRRTM4Q86VH4 590 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 C17orf82Q86X59 251 aaPredicted RBP12.78□□□□□ -0.36
CCDC42-202ENST00000539522 GALNT13Q8IUC8 556 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 GOLGA6L1Q8N7Z2 621 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 GSDMBQ8TAX9 411 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 PATE1Q8WXA2 126 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 LINC00615Q96LM1 132 aaPredicted RBP12.78□□□□□ -0.36
CCDC42-202ENST00000539522 SLC13A1Q9BZW2 595 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 VPS37BQ9H9H4 285 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 MED4Q9NPJ6 270 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 SCHIP1Q9P0W5 487 aaPredicted RBP12.78□□□□□ -0.36
CCDC42-202ENST00000539522 TBC1D29Q9UFV1 150 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 FBXO5Q9UKT4 447 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 PCOLCE2Q9UKZ9 415 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 GPR34Q9UPC5 381 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 WDR37Q9Y2I8 494 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 CSNK1G3Q9Y6M4 447 aa12.78□□□□□ -0.36
CCDC42-202ENST00000539522 GOLGA6L10A6NI86 522 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 FAM159BA6NKW6 160 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 KMOO15229 486 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 SIGLEC6O43699 453 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 NOBOXO60393 691 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 AHSGP02765 367 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 ZNF7P17097 686 aaPredicted RBP12.77□□□□□ -0.37
CCDC42-202ENST00000539522 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.37
CCDC42-202ENST00000539522 NSG1P42857 185 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 LEPRP48357 1165 aaKnown RBP12.77□□□□□ -0.37
CCDC42-202ENST00000539522 DMPKQ09013 629 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 SLC14A1Q13336 389 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 NFE2L1Q14494 772 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 PROX2Q3B8N5 592 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 CEP85LQ5SZL2 805 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 OGFOD3Q6PK18 319 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 SLC30A9Q6PML9 568 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 TRAPPC5Q8IUR0 188 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 NAGSQ8N159 534 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 KRT222Q8N1A0 295 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 EID2Q8N6I1 236 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 OR4C6Q8NH72 309 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 GIMAP7Q8NHV1 300 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 SLC30A3Q99726 388 aa12.77□□□□□ -0.37
CCDC42-202ENST00000539522 SH3GL2Q99962 352 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms