RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 SPATA13Q96N96 652 aa21.8■■□□□ 1.08
SCARB1-206ENST00000539320 TGM7Q96PF1 710 aa21.8■■□□□ 1.08
SCARB1-206ENST00000539320 APOL2Q9BQE5 337 aa21.8■■□□□ 1.08
SCARB1-206ENST00000539320 FBXO8Q9NRD0 319 aa21.8■■□□□ 1.08
SCARB1-206ENST00000539320 SIDT1Q9NXL6 827 aaKnown RBP21.8■■□□□ 1.08
SCARB1-206ENST00000539320 C2orf81A6NN90 581 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 POP7O75817 140 aaKnown RBP21.79■■□□□ 1.08
SCARB1-206ENST00000539320 ZNF189O75820 626 aaPredicted RBP21.79■■□□□ 1.08
SCARB1-206ENST00000539320 TJP3O95049 919 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 LIFP15018 202 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 LPOP22079 712 aaPredicted RBP21.79■■□□□ 1.08
SCARB1-206ENST00000539320 AKT1P31749 480 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 OLIG2Q13516 323 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 GPR18Q14330 331 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 PTPRCAPQ14761 206 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 CLCA4Q14CN2 919 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 TAF1AQ15573 450 aaPredicted RBP21.79■■□□□ 1.08
SCARB1-206ENST00000539320 LONRF2Q1L5Z9 754 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 TMEM220Q6QAJ8 160 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 XKR5Q6UX68 686 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 RANBP10Q6VN20 620 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 CCDC110Q8TBZ0 833 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 PPP1R2P1Q96PQ5 205 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 ARHGAP9Q9BRR9 750 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 APMAPQ9HDC9 416 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 SLC40A1Q9NP59 571 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 PILRAQ9UKJ1 303 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 WDR37Q9Y2I8 494 aa21.79■■□□□ 1.08
SCARB1-206ENST00000539320 OR2AG2A6NM03 316 aa21.78■■□□□ 1.08
SCARB1-206ENST00000539320 CAPN5O15484 640 aaPredicted RBP21.78■■□□□ 1.08
SCARB1-206ENST00000539320 PYGMP11217 842 aa21.78■■□□□ 1.08
SCARB1-206ENST00000539320 MSH3P20585 1137 aa21.78■■□□□ 1.08
SCARB1-206ENST00000539320 PBLDP30039 288 aaPredicted RBP21.78■■□□□ 1.08
SCARB1-206ENST00000539320 CYP4F2P78329 520 aa21.78■■□□□ 1.08
SCARB1-206ENST00000539320 NLGN4XQ8N0W4 816 aa21.78■■□□□ 1.08
SCARB1-206ENST00000539320 EXD3Q8N9H8 876 aa21.78■■□□□ 1.08
SCARB1-206ENST00000539320 NLGN4YQ8NFZ3 816 aaPredicted RBP21.78■■□□□ 1.08
SCARB1-206ENST00000539320 OR4K2Q8NGD2 314 aa21.78■■□□□ 1.08
SCARB1-206ENST00000539320 ZNF398Q8TD17 642 aa21.78■■□□□ 1.08
SCARB1-206ENST00000539320 ZNF514Q96K75 400 aaPredicted RBP21.78■■□□□ 1.08
SCARB1-206ENST00000539320 BAG1Q99933 345 aaPredicted RBP21.78■■□□□ 1.08
SCARB1-206ENST00000539320 FKBPLQ9UIM3 349 aa21.78■■□□□ 1.08
SCARB1-206ENST00000539320 DNMT3AQ9Y6K1 912 aaPredicted RBP21.78■■□□□ 1.08
SCARB1-206ENST00000539320 C5orf60A6NFR6 353 aa21.77■■□□□ 1.08
SCARB1-206ENST00000539320 POLR1CO15160 346 aaPredicted RBP21.77■■□□□ 1.08
SCARB1-206ENST00000539320 TOX3O15405 576 aaPredicted RBP21.77■■□□□ 1.08
SCARB1-206ENST00000539320 STK17BO94768 372 aa21.77■■□□□ 1.08
SCARB1-206ENST00000539320 LEPRP48357 1165 aaKnown RBP21.77■■□□□ 1.08
SCARB1-206ENST00000539320 TBR1Q16650 682 aa21.77■■□□□ 1.08
SCARB1-206ENST00000539320 FAM83HQ6ZRV2 1179 aaPredicted RBP21.77■■□□□ 1.08
SCARB1-206ENST00000539320 PEX26Q7Z412 305 aa21.77■■□□□ 1.08
SCARB1-206ENST00000539320 PRSS42Q7Z5A4 293 aa21.77■■□□□ 1.08
SCARB1-206ENST00000539320 GPR150Q8NGU9 434 aa21.77■■□□□ 1.08
SCARB1-206ENST00000539320 SLC12A9Q9BXP2 914 aa21.77■■□□□ 1.08
SCARB1-206ENST00000539320 SPRY4Q9C004 299 aa21.77■■□□□ 1.08
SCARB1-206ENST00000539320 ZNF768Q9H5H4 540 aaKnown RBP21.77■■□□□ 1.08
SCARB1-206ENST00000539320 AMFRQ9UKV5 643 aa21.77■■□□□ 1.08
SCARB1-206ENST00000539320 TMEM184BQ9Y519 407 aaPredicted RBP21.77■■□□□ 1.08
SCARB1-206ENST00000539320 B8ZZF3 427 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 RASSF9O75901 435 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 SRP72O76094 671 aaKnown RBP21.76■■□□□ 1.07
SCARB1-206ENST00000539320 MAP4P27816 1152 aaKnown RBP21.76■■□□□ 1.07
SCARB1-206ENST00000539320 NFE2L1Q14494 772 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 RPE65Q16518 533 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 FNBP1LQ5T0N5 605 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 DET1Q7L5Y6 550 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 TMEM139Q8IV31 216 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 SYCE1Q8N0S2 351 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 TXLNBQ8N3L3 684 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 UBL4BQ8N7F7 174 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 KIAA1143Q96AT1 154 aaPredicted RBP21.76■■□□□ 1.07
SCARB1-206ENST00000539320 LRRC45Q96CN5 670 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 TBL1YQ9BQ87 522 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 ASB8Q9H765 288 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 PSMD13Q9UNM6 376 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 KCTD3Q9Y597 815 aa21.76■■□□□ 1.07
SCARB1-206ENST00000539320 GOLGA6L9A6NEM1 432 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 MIF4GDA9UHW6 222 aaKnown RBP21.75■■□□□ 1.07
SCARB1-206ENST00000539320 CRTAMO95727 393 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 DLGAP3O95886 979 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 PTMAP06454 111 aaKnown RBP21.75■■□□□ 1.07
SCARB1-206ENST00000539320 SEPHS1P49903 392 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 ZNF140P52738 457 aaPredicted RBP21.75■■□□□ 1.07
SCARB1-206ENST00000539320 PDE1BQ01064 536 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 FOXM1Q08050 763 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 IRGCQ6NXR0 463 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 GAS2L3Q86XJ1 694 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 KLHDC8BQ8IXV7 354 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 BEND7Q8N7W2 519 aaPredicted RBP21.75■■□□□ 1.07
SCARB1-206ENST00000539320 TTC13Q8NBP0 860 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 OR13C4Q8NGS5 318 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 ZDHHC12Q96GR4 267 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 TRIT1Q9H3H1 467 aaKnown RBP21.75■■□□□ 1.07
SCARB1-206ENST00000539320 GPN2Q9H9Y4 310 aaPredicted RBP21.75■■□□□ 1.07
SCARB1-206ENST00000539320 EPHA6Q9UF33 1036 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 FEZ2Q9UHY8 353 aaPredicted RBP21.75■■□□□ 1.07
SCARB1-206ENST00000539320 CRLS1Q9UJA2 301 aa21.75■■□□□ 1.07
SCARB1-206ENST00000539320 ZNF891A8MT65 544 aaPredicted RBP21.74■■□□□ 1.07
SCARB1-206ENST00000539320 FAM87AP0C7U9 286 aa21.74■■□□□ 1.07
SCARB1-206ENST00000539320 MTHFD1P11586 935 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms