RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 BPIP17213 487 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 XRCC1P18887 633 aaPredicted RBP13.77□□□□□ -0.21
CCND1-204ENST00000539241 SLC19A1P41440 591 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 ATP5OP48047 213 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 GFERP55789 205 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 TEX44Q53QW1 395 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 CCDC70Q6NSX1 233 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 SYT10Q6XYQ8 523 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 TMEM26Q6ZUK4 368 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 TIPARPQ7Z3E1 657 aaKnown RBP13.77□□□□□ -0.21
CCND1-204ENST00000539241 TRIM48Q8IWZ4 208 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 SLC35B2Q8TB61 432 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 COG1Q8WTW3 980 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 C16orf45Q96MC5 204 aaPredicted RBP13.77□□□□□ -0.21
CCND1-204ENST00000539241 NAP1L3Q99457 506 aaPredicted RBP13.77□□□□□ -0.21
CCND1-204ENST00000539241 TIMM29Q9BSF4 260 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 EFHD1Q9BUP0 239 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 DNAJC16Q9Y2G8 782 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 R3HDM2Q9Y2K5 976 aaKnown RBP13.77□□□□□ -0.21
CCND1-204ENST00000539241 TMEM184BQ9Y519 407 aaPredicted RBP13.77□□□□□ -0.21
CCND1-204ENST00000539241 SAR1BQ9Y6B6 198 aa13.77□□□□□ -0.21
CCND1-204ENST00000539241 KIF2AO00139 706 aaPredicted RBP13.76□□□□□ -0.21
CCND1-204ENST00000539241 PGRMC1O00264 195 aaKnown RBP13.76□□□□□ -0.21
CCND1-204ENST00000539241 NKX2-8O15522 239 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 VEGFDO43915 354 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 PMPCBO75439 489 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 UBXN7O94888 489 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 CDK14O94921 469 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 C9P02748 559 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 PRKAR1AP10644 381 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 TYRP1P17643 537 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 AMD1P17707 334 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 PTPN3P26045 913 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 CASQ1P31415 396 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 CCR10P46092 362 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 POLE2P56282 527 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 ABHD18Q0P651 414 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 KCNAB2Q13303 367 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 SIX1Q15475 284 aaPredicted RBP13.76□□□□□ -0.21
CCND1-204ENST00000539241 SEPT7Q16181 437 aaKnown RBP13.76□□□□□ -0.21
CCND1-204ENST00000539241 LONRF2Q1L5Z9 754 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 UNC5BQ8IZJ1 945 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 ACTRT1Q8TDG2 376 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 C9orf72Q96LT7 481 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 SRPK1Q96SB4 655 aaKnown RBP13.76□□□□□ -0.21
CCND1-204ENST00000539241 FAM118BQ9BPY3 351 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 FERMT1Q9BQL6 677 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 TRIT1Q9H3H1 467 aaKnown RBP13.76□□□□□ -0.21
CCND1-204ENST00000539241 SIDT1Q9NXL6 827 aaKnown RBP13.76□□□□□ -0.21
CCND1-204ENST00000539241 UBP1Q9NZI7 540 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 OGFRQ9NZT2 677 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 ZNF624Q9P2J8 865 aaPredicted RBP13.76□□□□□ -0.21
CCND1-204ENST00000539241 SPO11Q9Y5K1 396 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 SLC30A1Q9Y6M5 507 aa13.76□□□□□ -0.21
CCND1-204ENST00000539241 PRR19A6NJB7 356 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 AURKAO14965 403 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 DLGAP3O95886 979 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 TUBB4AP04350 444 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 CDC20Q12834 499 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 KHDC1Q4VXA5 237 aaKnown RBP13.75□□□□□ -0.21
CCND1-204ENST00000539241 DARS2Q6PI48 645 aaKnown RBP13.75□□□□□ -0.21
CCND1-204ENST00000539241 ZNF547Q8IVP9 402 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 ATG4AQ8WYN0 398 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 MS4A14Q96JA4 679 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 TEKT5Q96M29 485 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 TGM7Q96PF1 710 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 VPS35Q96QK1 796 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 VAT1Q99536 393 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 BPIFA1Q9NP55 256 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 HOMER3Q9NSC5 361 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 POT1Q9NUX5 634 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 FAM153AQ9UHL3 310 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 TUBD1Q9UJT1 453 aa13.75□□□□□ -0.21
CCND1-204ENST00000539241 OR52A4PA6NMU1 304 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 ZNF185O15231 689 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 LIASO43766 372 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 BRAFP15056 766 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 RPL10P27635 214 aaKnown RBP13.74□□□□□ -0.21
CCND1-204ENST00000539241 RBL1P28749 1068 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 CD68P34810 354 aaPredicted RBP13.74□□□□□ -0.21
CCND1-204ENST00000539241 MC1RQ01726 317 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 FOXM1Q08050 763 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 WASHC5Q12768 1159 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 GTF2H3Q13889 308 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 MAP7Q14244 749 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 CCNG2Q16589 344 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 ATP13A5Q4VNC0 1218 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 DRICH1Q6PGQ1 229 aaPredicted RBP13.74□□□□□ -0.21
CCND1-204ENST00000539241 ABRAXAS1Q6UWZ7 409 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 WASH2PQ6VEQ5 465 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 PTRH1Q86Y79 214 aaKnown RBP13.74□□□□□ -0.21
CCND1-204ENST00000539241 TRAPPC5Q8IUR0 188 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 ESX1Q8N693 406 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 GDAP1Q8TB36 358 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 STARD8Q92502 1023 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 CXorf40BQ96DE9 158 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 TRABDQ9H4I3 376 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 WASH6PQ9NQA3 447 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 TMPRSS11EQ9UL52 423 aa13.74□□□□□ -0.21
CCND1-204ENST00000539241 RPS6KL1Q9Y6S9 549 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms