RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 UBA6A0AVT1 1052 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 ZNF185O15231 689 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 DDX3YO15523 660 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 KRT86O43790 486 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 DPM1O60762 260 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 TMEM63AO94886 807 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 MX2P20592 715 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 TUBB4BP68371 445 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 HSD11B2P80365 405 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 RAPSNQ13702 412 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 TUBB2AQ13885 445 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 GTF2H3Q13889 308 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 KLHL35Q6PF15 583 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 TMC3Q7Z5M5 1100 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 BPHLQ86WA6 291 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 PQLC3Q8N755 202 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 ENDOVQ8N8Q3 282 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 SLC38A9Q8NBW4 561 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 HDAC11Q96DB2 347 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 C19orf60Q96EN9 201 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 TCTN2Q96GX1 697 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 TTC25Q96NG3 672 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 TUBB2BQ9BVA1 445 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 MAGEE1Q9HCI5 957 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 BPIFA1Q9NP55 256 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 RAD18Q9NS91 495 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 IMP3Q9NV31 184 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 SEMA5BQ9P283 1151 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 NFKBIL1Q9UBC1 381 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 ERRFI1Q9UJM3 462 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 G3BP2Q9UN86 482 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 SNX7Q9UNH6 387 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 CFAP20Q9Y6A4 193 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 CSMD1Q96PZ7 3565 aa13.7□□□□□ -0.22
SMARCA4-206ENST00000538456 PIKFYVEQ9Y2I7 2098 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 TLCD2A6NGC4 264 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 MYO1FO00160 1098 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 AURKAO14965 403 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 CEACAM4O75871 244 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 LPOP22079 712 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 PBLDP30039 288 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 TMEM115Q12893 351 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 NR6A1Q15406 480 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 RPE65Q16518 533 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 ATP13A5Q4VNC0 1218 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 PRAMEF17Q5VTA0 474 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 IZUMO3Q5VZ72 239 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 LCN10Q6JVE6 187 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 FAM83HQ6ZRV2 1179 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 KMT5CQ86Y97 462 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 RHOT1Q8IXI2 618 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 D2HGDHQ8N465 521 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 RBMXL3Q8N7X1 1067 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 ADAMTS17Q8TE56 1095 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 ZNF830Q96NB3 372 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 AGAP3Q96P47 875 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 LMBRD1Q9NUN5 540 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 SOHLH2Q9NX45 425 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 SPO11Q9Y5K1 396 aa13.69□□□□□ -0.22
SMARCA4-206ENST00000538456 OR5K3A6NET4 321 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 GPR39O43194 453 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 LDLRP01130 860 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 KLK3P07288 261 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 ARCN1P48444 511 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 ITGA1P56199 1179 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 IFI35P80217 286 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 PPIDQ08752 370 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 AP1B1Q10567 949 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 PDK2Q15119 407 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 ZFYVE27Q5T4F4 411 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 DUS1LQ6P1R4 473 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 FBXO38Q6PIJ6 1188 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 ZNF517Q6ZMY9 492 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 AMZ2Q86W34 360 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 PNPLA2Q96AD5 504 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 ZNF501Q96CX3 271 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 CLIP3Q96DZ5 547 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 IMP4Q96G21 291 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 PPM1MQ96MI6 270 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 VPS35Q96QK1 796 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 CD180Q99467 661 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 TLR10Q9BXR5 811 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 KCND1Q9NSA2 647 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 HRASLS2Q9NWW9 162 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 GPR83Q9NYM4 423 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 TCFL5Q9UL49 500 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 PCDHGB7Q9Y5F8 929 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 HEY1Q9Y5J3 304 aa13.68□□□□□ -0.22
SMARCA4-206ENST00000538456 PCSK5Q92824 1860 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 SSU72P8A0A1W2PR75 194 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 OR2AG2A6NM03 316 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 MEN1O00255 615 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 POP7O75817 140 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 ZBTB11O95625 1053 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 MT-CYBP00156 380 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 CYP1A2P05177 515 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 MTHFD1P11586 935 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 VAV2P52735 878 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 CTSCP53634 463 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms