RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SMIM24O75264 130 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 ERAL1O75616 437 aaKnown RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 USP1O94782 785 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 MPOP05164 745 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 SRPRAP08240 638 aaKnown RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 SLC1A2P43004 574 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 NPY2RP49146 381 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 SPINT3P49223 89 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 TTPAP49638 278 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 ZNF135P52742 658 aaPredicted RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 PRKAG1P54619 331 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 RAB8AP61006 207 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 IRF8Q02556 426 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 C6orf10Q5SRN2 563 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 ZNF771Q7L3S4 317 aaPredicted RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 EFL1Q7Z2Z2 1120 aaKnown RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 NLRP14Q86W24 1093 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 CHCHD4Q8N4Q1 142 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 ASZ1Q8WWH4 475 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 ART4Q93070 314 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 ARL8AQ96BM9 186 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 HIC2Q96JB3 615 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 CDK15Q96Q40 435 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 PANX3Q96QZ0 392 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 ARHGAP9Q9BRR9 750 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 TSSK1BQ9BXA7 367 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 FAM124BQ9H5Z6 455 aaPredicted RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 IL1RL2Q9HB29 575 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 SEMA4GQ9NTN9 838 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 TXLNGQ9NUQ3 528 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 DRG1Q9Y295 367 aaKnown RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 TCAF1Q9Y4C2 921 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 CSPG4Q6UVK1 2322 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 POLQO75417 2590 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 BCLAF3A2AJT9 711 aaKnown RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 GPR37L1O60883 481 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 WDR47O94967 919 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 TUBB4AP04350 444 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 DDX5P17844 614 aaKnown RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 TNFRSF4P43489 277 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 NAGLUP54802 743 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 SRP54P61011 504 aaKnown RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 IFI35P80217 286 aaPredicted RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 ID2Q02363 134 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 FAM83EQ2M2I3 478 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 MPP7Q5T2T1 576 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 GPR153Q6NV75 609 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 AFTPHQ6ULP2 937 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 LRRC8CQ8TDW0 803 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 OR1E3Q8WZA6 343 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 OR2M4Q96R27 311 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 CHRDQ9H2X0 955 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 VWA7Q9Y334 891 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 TDRD15B5MCY1 1934 aaKnown RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 PRAMEF26H0Y7S4 382 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 TPP1O14773 563 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 FANCGO15287 622 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 ZW10O43264 779 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 ZNF500O60304 480 aaPredicted RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 SNRPAP09012 282 aaKnown RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 TAC1P20366 129 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 RPA3P35244 121 aaPredicted RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 GRK3P35626 688 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 ASPHQ12797 758 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 UBAP2Q5T6F2 1119 aaKnown RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 KIAA0895LQ68EN5 471 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 EFCAB3Q8N7B9 438 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 IMP4Q96G21 291 aaKnown RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 PPM1MQ96MI6 270 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 COPS7BQ9H9Q2 264 aaPredicted RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 LUZP4Q9P127 313 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 ATXN10Q9UBB4 475 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 PPARGC1AQ9UBK2 798 aaKnown RBP7.13□□□□□ -1.27
MSH6-209ENST00000538136 HS3ST2Q9Y278 367 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 FADS3Q9Y5Q0 445 aa7.13□□□□□ -1.27
MSH6-209ENST00000538136 A0A1B0GTW7 788 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 A0A1W2PPM1 405 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 A0A1W2PQF6 199 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 FAM92AA1XBS5 289 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 SLC16A5O15375 505 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 MAGEC1O60732 1142 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 PRAMEF10O60809 474 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 SIX3O95343 332 aaPredicted RBP7.12□□□□□ -1.27
MSH6-209ENST00000538136 PGAM1P18669 254 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 HSD17B3P37058 310 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 KIR2DL1P43626 348 aaPredicted RBP7.12□□□□□ -1.27
MSH6-209ENST00000538136 SCAPQ12770 1279 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 GPSM1Q86YR5 675 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 ETFBKMTQ8IXQ9 262 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 CDYL2Q8N8U2 506 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 TRPC4APQ8TEL6 797 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 MTERF1Q99551 399 aaKnown RBP7.12□□□□□ -1.27
MSH6-209ENST00000538136 MECRQ9BV79 373 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 SLC32A1Q9H598 525 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 PIF1Q9H611 641 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 LRRC4CQ9HCJ2 640 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 RAD18Q9NS91 495 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 TAC3Q9UHF0 121 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 A6NNZ2 444 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 H7BY64 318 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms