RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 UGT1A4P22310 534 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 RGRP47804 291 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 ATP11AP98196 1134 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 SEPT7Q16181 437 aaKnown RBP8.93□□□□□ -0.98
USP28-205ENST00000537706 TDRD12Q587J7 1177 aaKnown RBP8.93□□□□□ -0.98
USP28-205ENST00000537706 RESP18Q5W5W9 173 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 CERS6Q6ZMG9 384 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 KRBA2Q6ZNG9 492 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 GPR135Q8IZ08 494 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 UMODL1-AS1Q8N2C9 162 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 TMEM35BQ8NCS4 154 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 CATSPER1Q8NEC5 780 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 ADAMTS18Q8TE60 1221 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 NRGNQ92686 78 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 NOL6Q9H6R4 1146 aaKnown RBP8.93□□□□□ -0.98
USP28-205ENST00000537706 SCHIP1Q9P0W5 487 aaPredicted RBP8.93□□□□□ -0.98
USP28-205ENST00000537706 TINAGQ9UJW2 476 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 FBXL4Q9UKA2 621 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 NIPBLQ6KC79 2804 aaeCLIP8.93□□□□□ -0.98
USP28-205ENST00000537706 IDSB3KWA1 339 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 GPR89AB7ZAQ6 455 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 FGF10O15520 208 aaPredicted RBP8.93□□□□□ -0.98
USP28-205ENST00000537706 NUAK1O60285 661 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 PRAMEF2O60811 474 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 GPR89BP0CG08 455 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 LHCGRP22888 699 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 SPAM1P38567 509 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 ZFYVE27Q5T4F4 411 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 PRAMEF17Q5VTA0 474 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 PPP1R32Q7Z5V6 425 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 BBS5Q8N3I7 341 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 GOT1L1Q8NHS2 421 aaPredicted RBP8.93□□□□□ -0.98
USP28-205ENST00000537706 ASB5Q8WWX0 329 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 N4BP2L2Q92802 583 aaPredicted RBP8.93□□□□□ -0.98
USP28-205ENST00000537706 SCAMP4Q969E2 229 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 SCRN2Q96FV2 425 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 THOC3Q96J01 351 aaKnown RBP8.93□□□□□ -0.98
USP28-205ENST00000537706 PDLIM2Q96JY6 352 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 TAAR6Q96RI8 345 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 RIOK2Q9BVS4 552 aaKnown RBP8.93□□□□□ -0.98
USP28-205ENST00000537706 POLDIP3Q9BY77 421 aaKnown RBP8.93□□□□□ -0.98
USP28-205ENST00000537706 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.93□□□□□ -0.98
USP28-205ENST00000537706 NUP62CLQ9H1M0 184 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 PDFQ9HBH1 243 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 SLC6A20Q9NP91 592 aa8.93□□□□□ -0.98
USP28-205ENST00000537706 NPIPB15A6NHN6 443 aaPredicted RBP8.92□□□□□ -0.98
USP28-205ENST00000537706 FAM72CH0Y354 149 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 GOLGA8SH3BPF8 625 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 J3KR12 359 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 KMOO15229 486 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 SDC4P31431 198 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 FLT3P36888 993 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 HSPA9P38646 679 aaKnown RBP8.92□□□□□ -0.98
USP28-205ENST00000537706 PPP1CAP62136 330 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 CDSNQ15517 529 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 CDO1Q16878 200 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 ARMC12Q5T9G4 340 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 FAM72AQ5TYM5 149 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 AGAP9Q5VTM2 703 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 FAM72DQ6L9T8 149 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 ABRAXAS1Q6UWZ7 409 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 WASH2PQ6VEQ5 465 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 FAM72BQ86X60 149 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 ZGRF1Q86YA3 2104 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 DMRTC2Q8IXT2 367 aaPredicted RBP8.92□□□□□ -0.98
USP28-205ENST00000537706 RAVER1Q8IY67 606 aaKnown RBP8.92□□□□□ -0.98
USP28-205ENST00000537706 MBD6Q96DN6 1003 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 CCDC34Q96HJ3 373 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 AP1M1Q9BXS5 423 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 HRASLS2Q9NWW9 162 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 CDC23Q9UJX2 597 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 RCOR1Q9UKL0 485 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 OR5K3A6NET4 321 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 CDH3P22223 829 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 PREPP48147 710 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 DCDP81605 110 aaKnown RBP8.92□□□□□ -0.98
USP28-205ENST00000537706 ABRQ12979 859 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 PRKAA1Q13131 559 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 TUBB8Q3ZCM7 444 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 KRTCAP3Q53RY4 240 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 SMYD5Q6GMV2 418 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 RBM43Q6ZSC3 357 aaKnown RBP8.92□□□□□ -0.98
USP28-205ENST00000537706 ARCQ7LC44 396 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 BNIPLQ7Z465 357 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 TSPAN33Q86UF1 283 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 SPPL2CQ8IUH8 684 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 MYRIPQ8NFW9 859 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 LMO3Q8TAP4 145 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 CCDC110Q8TBZ0 833 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 PROKR1Q8TCW9 393 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 TRIM44Q96DX7 344 aaPredicted RBP8.92□□□□□ -0.98
USP28-205ENST00000537706 SECISBP2Q96T21 854 aaKnown RBP8.92□□□□□ -0.98
USP28-205ENST00000537706 TIMM29Q9BSF4 260 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 TLR10Q9BXR5 811 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 DNAJC16Q9Y2G8 782 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 PLEKHA6Q9Y2H5 1048 aa8.92□□□□□ -0.98
USP28-205ENST00000537706 MRPS2Q9Y399 296 aaKnown RBP8.92□□□□□ -0.98
USP28-205ENST00000537706 PRRC2AP48634 2157 aaKnown RBP8.91□□□□□ -0.98
USP28-205ENST00000537706 C17orf113A0A1B0GUU1 675 aa8.91□□□□□ -0.98
USP28-205ENST00000537706 E9PLN8 166 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms