RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 ARL8BQ9NVJ2 186 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 TAS2R7Q9NYW3 318 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 FPGTO14772 594 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 VIPP01282 170 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 TPSB2P20231 275 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 CD247P20963 164 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 MPSTP25325 297 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 PTX3P26022 381 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-209ENST00000537178 ALDH4A1P30038 563 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 PNLIPRP1P54315 467 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 INHBEP58166 350 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 FSTL1Q12841 308 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 TPSAB1Q15661 275 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 EML3Q32P44 896 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 HECTD2Q5U5R9 776 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 MAP1SQ66K74 1059 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-209ENST00000537178 LLGL2Q6P1M3 1020 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 CLNKQ7Z7G1 428 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 SPPL2CQ8IUH8 684 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 PGAM4Q8N0Y7 254 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 CADM2Q8N3J6 435 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 SLC44A1Q8WWI5 657 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 ART5Q96L15 291 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 MTFR1LQ9H019 292 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 RMI1Q9H9A7 625 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 A0A1W2PPM1 405 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 GRM6O15303 877 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 TULP3O75386 442 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 CLDN9O95484 217 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 NDST3O95803 873 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 RLN2P04090 185 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 NT5EP21589 574 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 GSCP56915 257 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-209ENST00000537178 RTP1P59025 263 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 ZNF155Q12901 538 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-209ENST00000537178 PARP15Q460N3 678 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 ADGRG6Q86SQ4 1221 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 UNC5BQ8IZJ1 945 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 DNAJA4Q8WW22 397 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-209ENST00000537178 LPGAT1Q92604 370 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 BTN2A3PQ96KV6 586 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 ASTN1O14525 1302 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 WNT10BO00744 389 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 AIREO43918 545 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 FGF19O95750 216 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 PRH1P02810 166 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 PGRP06401 933 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 ANXA4P09525 319 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-209ENST00000537178 SMIM10L2AP0DMW4 78 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 SMIM10L2BP0DMW5 78 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 ADRA1BP35368 520 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 GNALP38405 381 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 GRM5P41594 1212 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 CAPSQ13938 189 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 TMEM44Q2T9K0 475 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 LPCAT4Q643R3 524 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 ZNF613Q6PF04 617 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 TOP1MTQ969P6 601 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 ZSWIM3Q96MP5 696 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 COMMD4Q9H0A8 199 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 TBC1D14Q9P2M4 693 aa10.54□□□□□ -0.72
CLIP1-209ENST00000537178 NPEPPSL1A6NEC2 478 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 GALK1P51570 392 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 CRYBB1P53674 252 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 YBEYP58557 167 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 NOMO1Q15155 1222 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 IL17AQ16552 155 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 ZNF311Q5JNZ3 666 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 EMC10Q5UCC4 262 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 POMZP3Q6PJE2 187 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 AHSA2Q719I0 299 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 FAM13CQ8NE31 585 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 OR4K2Q8NGD2 314 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 CENPNQ96H22 339 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 NSMCE3Q96MG7 304 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 KLHL5Q96PQ7 755 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 HIST1H2AAQ96QV6 131 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 NODALQ96S42 347 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 AGO3Q9H9G7 860 aaKnown RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 TRNAU1APQ9NX07 287 aaKnown RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 ELOVL2Q9NXB9 296 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 NUDT4Q9NZJ9 180 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 SLC17A7Q9P2U7 560 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 SLC27A5Q9Y2P5 690 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 MEMO1Q9Y316 297 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 PCDHGA10Q9Y5H3 936 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 PMF1-BGLAPU3KQ54 211 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 SBF2Q86WG5 1849 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 OR1I1O60431 355 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 PAGE1O75459 146 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 TIE1P35590 1138 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 CEBPGP53567 150 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 TAS2R40P59535 323 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 LIPEQ05469 1076 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 RASGEF1BQ0VAM2 473 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 ITGA7Q13683 1181 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 IL23RQ5VWK5 629 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 ADNP2Q6IQ32 1131 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 TMEM192Q8IY95 271 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 ZNF615Q8N8J6 731 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms