RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 FIGLAQ6QHK4 219 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 RBPMS2Q6ZRY4 209 aaKnown RBP5.26□□□□□ -1.57
PRKDC-208ENST00000536710 ATG9AQ7Z3C6 839 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-208ENST00000536710 CENPVQ7Z7K6 275 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-208ENST00000536710 RNF113BQ8IZP6 322 aaKnown RBP5.26□□□□□ -1.57
PRKDC-208ENST00000536710 C1orf52Q8N6N3 182 aaKnown RBP5.26□□□□□ -1.57
PRKDC-208ENST00000536710 NKAIN3Q8N8D7 197 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 PI4KAP1Q8N8J0 262 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 SLC4A11Q8NBS3 891 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 PIGTQ969N2 578 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 FAM81BQ96LP2 452 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 FER1L6-AS2Q96M78 137 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 FCRL4Q96PJ5 515 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 MOV10L1Q9BXT6 1211 aaKnown RBP5.26□□□□□ -1.57
PRKDC-208ENST00000536710 SEZ6LQ9BYH1 1024 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 GPR88Q9GZN0 384 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 LRMDAQ9H2I8 198 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 ST6GALNAC4Q9H4F1 302 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 TBC1D17Q9HA65 648 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 PIH1D3Q9NQM4 214 aaKnown RBP5.26□□□□□ -1.57
PRKDC-208ENST00000536710 SIX4Q9UIU6 781 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 TUBE1Q9UJT0 475 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 PCDHA7Q9UN72 937 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 TMEM178BH3BS89 294 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 MID1O15344 667 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 TSPAN1O60635 241 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 C22orf31O95567 290 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 HSP90AB1P08238 724 aaKnown RBP5.25□□□□□ -1.57
PRKDC-208ENST00000536710 CDK4P11802 303 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 POLR2CP19387 275 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-208ENST00000536710 S1PR1P21453 382 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 PTAFRP25105 342 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 PCGF2P35227 344 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 ZNF75DP51815 510 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 ISL1P61371 349 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 ZNF155Q12901 538 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-208ENST00000536710 HSPB3Q12988 150 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 TMEM35AQ53FP2 167 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 ODF3L1Q8IXM7 274 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 ZNF595Q8IYB9 648 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 PELI3Q8N2H9 469 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 CAMKVQ8NCB2 501 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 EXD1Q8NHP7 514 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 TMEM19Q96HH6 336 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 OR6C1Q96RD1 312 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 OLFM1Q99784 485 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 NTPCRQ9BSD7 190 aaKnown RBP5.25□□□□□ -1.57
PRKDC-208ENST00000536710 NOL11Q9H8H0 719 aaKnown RBP5.25□□□□□ -1.57
PRKDC-208ENST00000536710 ANKZF1Q9H8Y5 726 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 EQTNQ9NQ60 294 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 ZNF224Q9NZL3 707 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 STK26Q9P289 416 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 IL17BQ9UHF5 180 aa5.25□□□□□ -1.57
PRKDC-208ENST00000536710 COL3A1P02461 1466 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-208ENST00000536710 PDS5AQ29RF7 1337 aaKnown RBP5.24□□□□□ -1.57
PRKDC-208ENST00000536710 IGLV5-37A0A075B6J1 123 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 ARHGEF37A1IGU5 675 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 MEIS2O14770 477 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 TO15178 435 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 XRCC3O43542 346 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 CELF2O95319 508 aaKnown RBP5.24□□□□□ -1.57
PRKDC-208ENST00000536710 BMP10O95393 424 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 ACAA1P09110 424 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-208ENST00000536710 LINGO3P0C6S8 592 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 MYOD1P15172 320 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 CDK3Q00526 305 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 PLIN5Q00G26 463 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 GAGE2BQ13066 116 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 GAGE2EQ4V326 116 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 SETMARQ53H47 684 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-208ENST00000536710 GAGE2AQ6NT46 116 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 RAD9BQ6WBX8 426 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 ADCK2Q7Z695 626 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 METTL23Q86XA0 190 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 MFN1Q8IWA4 741 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 CLIP4Q8N3C7 705 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 SMRP1Q8NCR6 262 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 OR2AJ1Q8NGZ0 328 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 OR52I2Q8NH67 350 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 SETD6Q8TBK2 473 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 SLC20A1Q8WUM9 679 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 SMG7Q92540 1137 aaKnown RBP5.24□□□□□ -1.57
PRKDC-208ENST00000536710 ABTB1Q969K4 478 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-208ENST00000536710 ZNF558Q96NG5 402 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 ZNF582Q96NG8 517 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-208ENST00000536710 C1QTNF7Q9BXJ2 289 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 HHATLQ9HCP6 504 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 SMARCAL1Q9NZC9 954 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 KLHL9Q9P2J3 617 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 GAGE2DQ9UEU5 116 aa5.24□□□□□ -1.57
PRKDC-208ENST00000536710 SOS1Q07889 1333 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-208ENST00000536710 PRAG1Q86YV5 1406 aa5.23□□□□□ -1.57
PRKDC-208ENST00000536710 A0A1W2PP11 408 aa5.23□□□□□ -1.57
PRKDC-208ENST00000536710 FAM170AA1A519 330 aa5.23□□□□□ -1.57
PRKDC-208ENST00000536710 OR2M5A3KFT3 312 aa5.23□□□□□ -1.57
PRKDC-208ENST00000536710 OR5K3A6NET4 321 aa5.23□□□□□ -1.57
PRKDC-208ENST00000536710 PENKP01210 267 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-208ENST00000536710 KRT19P08727 400 aa5.23□□□□□ -1.57
PRKDC-208ENST00000536710 GP5P40197 560 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms