RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 FREM2Q5SZK8 3169 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 IGF2RP11717 2491 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 IGLV3-16A0A075B6K0 115 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 TRABD2BA6NFA1 517 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 OR2AG2A6NM03 316 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 CD3EAPO15446 510 aaKnown RBP13.32□□□□□ -0.28
RPAIN-205ENST00000536255 AP2A2O94973 939 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 VAPBO95292 243 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 CAPNS1P04632 268 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 ACP5P13686 325 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 SLC2A4P14672 509 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 ZNF7P17097 686 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-205ENST00000536255 TTPAP49638 278 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 CDKN1CP49918 316 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-205ENST00000536255 CLCNKAP51800 687 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 DHX9Q08211 1270 aaKnown RBP13.32□□□□□ -0.28
RPAIN-205ENST00000536255 DBN1Q16643 649 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 ANKRD20A4Q4UJ75 823 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 FNBP1LQ5T0N5 605 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 CES3Q6UWW8 571 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 PACS1Q6VY07 963 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 PIANPQ8IYJ0 282 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 RASGEF1AQ8N9B8 481 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 WDR48Q8TAF3 677 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 DEPDC7Q96QD5 511 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 EBNA1BP2Q99848 306 aaKnown RBP13.32□□□□□ -0.28
RPAIN-205ENST00000536255 LRRC1Q9BTT6 524 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 RABGEF1Q9UJ41 708 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 PLEKHM1Q9Y4G2 1056 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 MYLKQ15746 1914 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 EPG5Q9HCE0 2579 aa13.32□□□□□ -0.28
RPAIN-205ENST00000536255 MAP1BP46821 2468 aaKnown RBP13.32□□□□□ -0.28
RPAIN-205ENST00000536255 KNTC1P50748 2209 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 EIF3HO15372 352 aaKnown RBP eCLIP13.31□□□□□ -0.28
RPAIN-205ENST00000536255 NUDT21O43809 227 aaKnown RBP13.31□□□□□ -0.28
RPAIN-205ENST00000536255 TCEA3O75764 348 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 GSTM1P09488 218 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 GLB1P16278 677 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 CA5AP35218 305 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 PRLHRP49683 370 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 CTSCP53634 463 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 GSTM4Q03013 218 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 THOC5Q13769 683 aaKnown RBP13.31□□□□□ -0.28
RPAIN-205ENST00000536255 LONRF1Q17RB8 773 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 BCL7AQ4VC05 210 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 RNF187Q5TA31 235 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-205ENST00000536255 RBM44Q6ZP01 1051 aaKnown RBP13.31□□□□□ -0.28
RPAIN-205ENST00000536255 CENPUQ71F23 418 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 DET1Q7L5Y6 550 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 AMZ2Q86W34 360 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 C17orf82Q86X59 251 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-205ENST00000536255 ZNF547Q8IVP9 402 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 LMNTD2Q8IXW0 634 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.31□□□□□ -0.28
RPAIN-205ENST00000536255 CALML6Q8TD86 181 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 NXPE2Q96DL1 559 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 SGF29Q96ES7 293 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 CARD6Q9BX69 1037 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 FAM129AQ9BZQ8 928 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 FOXP3Q9BZS1 431 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 OSGEPL1Q9H4B0 414 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 CCDC86Q9H6F5 360 aaKnown RBP13.31□□□□□ -0.28
RPAIN-205ENST00000536255 KLC4Q9NSK0 619 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 LRIT1Q9P2V4 623 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 KCNK6Q9Y257 313 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 VPS9D1Q9Y2B5 631 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 RNF215Q9Y6U7 377 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 FAM169AQ9Y6X4 670 aa13.31□□□□□ -0.28
RPAIN-205ENST00000536255 OR5K4A6NMS3 321 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 NTN3O00634 580 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-205ENST00000536255 CASC3O15234 703 aaKnown RBP13.3□□□□□ -0.28
RPAIN-205ENST00000536255 TP73O15350 636 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 CSO75390 466 aaKnown RBP13.3□□□□□ -0.28
RPAIN-205ENST00000536255 NDUFS3O75489 264 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 POP7O75817 140 aaKnown RBP13.3□□□□□ -0.28
RPAIN-205ENST00000536255 RPLP0P05388 317 aaKnown RBP13.3□□□□□ -0.28
RPAIN-205ENST00000536255 OR56A5P0C7T3 313 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 PRSS56P0CW18 603 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 PNLIPP16233 465 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 OGNP20774 298 aaKnown RBP13.3□□□□□ -0.28
RPAIN-205ENST00000536255 IDSP22304 550 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 ARNTP27540 789 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 PLTPP55058 493 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 MAZP56270 477 aaKnown RBP13.3□□□□□ -0.28
RPAIN-205ENST00000536255 B4GALNT1Q00973 533 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 SLC7A5Q01650 507 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 GUCY2DQ02846 1103 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 PDIA2Q13087 525 aaKnown RBP13.3□□□□□ -0.28
RPAIN-205ENST00000536255 BIRC2Q13490 618 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 SPIDRQ14159 915 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 ISXQ2M1V0 245 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 PLA2G4EQ3MJ16 856 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 MSS51Q4VC12 460 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 SPANXN3Q5MJ09 141 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 NEPROQ6NW34 567 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 NAGSQ8N159 534 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 AVL9Q8NBF6 648 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 NOA1Q8NC60 698 aaKnown RBP13.3□□□□□ -0.28
RPAIN-205ENST00000536255 GPR150Q8NGU9 434 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 MDM1Q8TC05 714 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms