RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 NAPRTQ6XQN6 538 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 TMPRSS7Q7RTY8 843 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 ZNF438Q7Z4V0 828 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 SPNS2Q8IVW8 549 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 OR2L2Q8NH16 312 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 MAPK15Q8TD08 544 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 LKAAEAR1Q8TD35 194 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 STAMBPL1Q96FJ0 436 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 LINC00615Q96LM1 132 aaPredicted RBP17.56■□□□□ 0.4
DDX55-204ENST00000536079 LRRC1Q9BTT6 524 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 ZNF624Q9P2J8 865 aaPredicted RBP17.56■□□□□ 0.4
DDX55-204ENST00000536079 ANAPC5Q9UJX4 755 aa17.56■□□□□ 0.4
DDX55-204ENST00000536079 DNMT3AQ9Y6K1 912 aaPredicted RBP17.56■□□□□ 0.4
DDX55-204ENST00000536079 OR52A4PA6NMU1 304 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 CFAP99D6REC4 459 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 KIF2AO00139 706 aaPredicted RBP17.55■□□□□ 0.4
DDX55-204ENST00000536079 NUDT21O43809 227 aaKnown RBP17.55■□□□□ 0.4
DDX55-204ENST00000536079 TRIM16O95361 564 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 TUBB4AP04350 444 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 SLC19A1P41440 591 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 UBE2IP63279 158 aaKnown RBP17.55■□□□□ 0.4
DDX55-204ENST00000536079 CKAP4Q07065 602 aaKnown RBP17.55■□□□□ 0.4
DDX55-204ENST00000536079 ITIH4Q14624 930 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 ZNF789Q5FWF6 425 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.55■□□□□ 0.4
DDX55-204ENST00000536079 ABRAXAS1Q6UWZ7 409 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 MAATS1Q7Z4T9 603 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 NOA1Q8NC60 698 aaKnown RBP17.55■□□□□ 0.4
DDX55-204ENST00000536079 SPDYE1Q8NFV5 336 aaPredicted RBP17.55■□□□□ 0.4
DDX55-204ENST00000536079 HEXDCQ8WVB3 486 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 NAT6Q93015 286 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 SAMD15Q9P1V8 674 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 PSMD13Q9UNM6 376 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 RPS6KL1Q9Y6S9 549 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 RP1P56715 2156 aa17.55■□□□□ 0.4
DDX55-204ENST00000536079 COL27A1Q8IZC6 1860 aaPredicted RBP17.54■□□□□ 0.4
DDX55-204ENST00000536079 ZFC3H1O60293 1989 aaKnown RBP17.54■□□□□ 0.4
DDX55-204ENST00000536079 MAGEB16A2A368 324 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 IQCF5A8MTL0 148 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 PDZK1P1A8MUH7 402 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 NTN3O00634 580 aaPredicted RBP17.54■□□□□ 0.4
DDX55-204ENST00000536079 POLBP06746 335 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 RALBP11234 206 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 ITGB6P18564 788 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 ELK3P41970 407 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 NSG1P42857 185 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 E2F1Q01094 437 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 FASTKD3Q14CZ7 662 aaKnown RBP17.54■□□□□ 0.4
DDX55-204ENST00000536079 METRNLQ641Q3 311 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 CENPUQ71F23 418 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 TMPRSS9Q7Z410 1059 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 SPRED1Q7Z699 444 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 CFAP206Q8IYR0 622 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 KIF18AQ8NI77 898 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 ZNF514Q96K75 400 aaPredicted RBP17.54■□□□□ 0.4
DDX55-204ENST00000536079 EBNA1BP2Q99848 306 aaKnown RBP17.54■□□□□ 0.4
DDX55-204ENST00000536079 CCM2Q9BSQ5 444 aa17.54■□□□□ 0.4
DDX55-204ENST00000536079 ATXN7L1Q9ULK2 861 aaPredicted RBP17.54■□□□□ 0.4
DDX55-204ENST00000536079 CFAP20Q9Y6A4 193 aaKnown RBP17.54■□□□□ 0.4
DDX55-204ENST00000536079 FAM221BA6H8Z2 402 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 USP1O94782 785 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 MT-CO3P00414 261 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 RPLP0P05388 317 aaKnown RBP17.53■□□□□ 0.4
DDX55-204ENST00000536079 IDSP22304 550 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 PDHA2P29803 388 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 FASLGP48023 281 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 PREPP48147 710 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 PDX1P52945 283 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 SHC2P98077 582 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 CFHR1Q03591 330 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 NR1D2Q14995 579 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 DNAJC21Q5F1R6 531 aaKnown RBP17.53■□□□□ 0.4
DDX55-204ENST00000536079 AGAP9Q5VTM2 703 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 LYPLAL1Q5VWZ2 237 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 NKAIN2Q5VXU1 208 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 ARMC3Q5W041 872 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 NEPROQ6NW34 567 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 DUS1LQ6P1R4 473 aaKnown RBP17.53■□□□□ 0.4
DDX55-204ENST00000536079 ZDHHC24Q6UX98 284 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 WASH2PQ6VEQ5 465 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 CERS6Q6ZMG9 384 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 CCNJLQ8IV13 435 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 DENND6AQ8IWF6 608 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 KRT222Q8N1A0 295 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 LRRN4CLQ8ND94 238 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 GPR150Q8NGU9 434 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDX55-204ENST00000536079 INSM2Q96T92 566 aaPredicted RBP17.53■□□□□ 0.4
DDX55-204ENST00000536079 WWP1Q9H0M0 922 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 P2RY12Q9H244 342 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 LRRN3Q9H3W5 708 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 WASH6PQ9NQA3 447 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 EVA1BQ9NVM1 165 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 CPNE7Q9UBL6 633 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 TEX264Q9Y6I9 313 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 FAM169AQ9Y6X4 670 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 PTPRBP23467 1997 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 AKAP13Q12802 2813 aa17.53■□□□□ 0.4
DDX55-204ENST00000536079 ESYT3A0FGR9 886 aa17.52■□□□□ 0.4
DDX55-204ENST00000536079 RHPN2P1A8MT19 583 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms