RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PIKFYVEQ9Y2I7 2098 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 TRBV5-4A0A0C4DH59 114 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 OR4F21O95013 312 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 PRR35P0CG20 571 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 CAPN3P20807 821 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 RPS3P23396 243 aaKnown RBP eCLIP13.2□□□□□ -0.34e-6■■■■□ 22.8
VPS33B-202ENST00000535906 ACRV1P26436 265 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 SERPINA4P29622 427 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 NAA20P61599 178 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 CHRNA6Q15825 494 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 PITRM1Q5JRX3 1037 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 SAMD4BQ5PRF9 694 aaKnown RBP13.2□□□□□ -0.3
VPS33B-202ENST00000535906 RBFAQ8N0V3 343 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 ELMOD1Q8N336 334 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 OR2T11Q8NH01 316 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 ROPN1LQ96C74 230 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 DUS3LQ96G46 650 aaKnown RBP13.2□□□□□ -0.3
VPS33B-202ENST00000535906 ASAH2Q9NR71 780 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 NDUFA13Q9P0J0 144 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 APPL1Q9UKG1 709 aa13.2□□□□□ -0.3
VPS33B-202ENST00000535906 ZNF106Q9H2Y7 1883 aaKnown RBP13.19□□□□□ -0.3
VPS33B-202ENST00000535906 GLYATL1P3A0A0U1RQE8 302 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 TCRBV3S1A0A5B6 114 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 BBIP1A8MTZ0 92 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 SLC25A14O95258 325 aaPredicted RBP13.19□□□□□ -0.3
VPS33B-202ENST00000535906 TRIM16O95361 564 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 ADH1AP07327 375 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 ZNF26P17031 533 aaPredicted RBP13.19□□□□□ -0.3
VPS33B-202ENST00000535906 ITGALP20701 1170 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 ERVFC1P60507 584 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 ERVPABLB-1P60509 514 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 FUT11Q495W5 492 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 XKR7Q5GH72 579 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 ASTLQ6HA08 431 aaPredicted RBP13.19□□□□□ -0.3
VPS33B-202ENST00000535906 GPRIN3Q6ZVF9 776 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 TMEM25Q86YD3 366 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 AHI1Q8N157 1196 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 GALNT4Q8N4A0 578 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 CDYL2Q8N8U2 506 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 GPR26Q8NDV2 337 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 TCEAL4Q96EI5 215 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 SH3GL3Q99963 347 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 BEGAINQ9BUH8 593 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 NUSAP1Q9BXS6 441 aaKnown RBP13.19□□□□□ -0.3
VPS33B-202ENST00000535906 C11orf49Q9H6J7 331 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 GNPTGQ9UJJ9 305 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 GPR45Q9Y5Y3 372 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 SLC4A7Q9Y6M7 1214 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 PRRC2BQ5JSZ5 2229 aaKnown RBP13.19□□□□□ -0.3
VPS33B-202ENST00000535906 GOLGA8CPA6NN73 597 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 ZBBXA8MT70 800 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 HIDE1A8MVS5 230 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 H0YJX3 145 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 VPS4BO75351 444 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 TNFAIP8O95379 198 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 MATN4O95460 622 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 CYBBP04839 570 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 SLC7A2P52569 658 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 YBX1P67809 324 aaKnown RBP13.19□□□□□ -0.3
VPS33B-202ENST00000535906 C6orf10Q5SRN2 563 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 OGFOD2Q6N063 350 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 LETMD1Q6P1Q0 360 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 CRTC1Q6UUV9 634 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 FRA10AC1Q70Z53 315 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 METTL3Q86U44 580 aaKnown RBP13.19□□□□□ -0.3
VPS33B-202ENST00000535906 SATL1Q86VE3 508 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 TMEM199Q8N511 208 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 PCYOX1LQ8NBM8 494 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 EME1Q96AY2 570 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 TEX37Q96LM6 180 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 CNBD2Q96M20 576 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 ZNF696Q9H7X3 374 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 NOL11Q9H8H0 719 aaKnown RBP13.19□□□□□ -0.3
VPS33B-202ENST00000535906 IL1RL2Q9HB29 575 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 SLC52A3Q9NQ40 469 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 NUDT4Q9NZJ9 180 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 GMPR2Q9P2T1 348 aaKnown RBP13.19□□□□□ -0.3
VPS33B-202ENST00000535906 TMCO1Q9UM00 188 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 PCDHGB4Q9UN71 923 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 PCDHGB5Q9Y5G0 923 aa13.19□□□□□ -0.3
VPS33B-202ENST00000535906 GIPC1O14908 333 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 KIAA0355O15063 1070 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 BAIAP3O94812 1187 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 PGM3O95394 542 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 CHEK2O96017 543 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 CHRM1P11229 460 aaPredicted RBP13.18□□□□□ -0.3
VPS33B-202ENST00000535906 IDO1P14902 403 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 SLC7A1P30825 629 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 SNRPD1P62314 119 aaKnown RBP13.18□□□□□ -0.3
VPS33B-202ENST00000535906 CDKL1Q00532 357 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 RPS6KA2Q15349 733 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 MYLK3Q32MK0 819 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 C6orf52Q5T4I8 152 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 ADAMTSL2Q86TH1 951 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 SLCO4A1Q96BD0 722 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 ZNF382Q96SR6 550 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 C19orf43Q9BQ61 176 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 TCF25Q9BQ70 676 aa13.18□□□□□ -0.3
VPS33B-202ENST00000535906 GPATCH1Q9BRR8 931 aaKnown RBP13.18□□□□□ -0.3
VPS33B-202ENST00000535906 CRLS1Q9UJA2 301 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms