RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 CRTAMO95727 393 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 C9P02748 559 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 KLK3P07288 261 aaPredicted RBP13□□□□□ -0.33
CLSTN3-205ENST00000535452 GFERP55789 205 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 GPR18Q14330 331 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 PRKD1Q15139 912 aaPredicted RBP13□□□□□ -0.33
CLSTN3-205ENST00000535452 LARP7Q4G0J3 582 aaKnown RBP eCLIP13□□□□□ -0.33
CLSTN3-205ENST00000535452 ATP13A5Q4VNC0 1218 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 MFSD7Q6UXD7 560 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 SPOCD1Q6ZMY3 1216 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 PRSS42Q7Z5A4 293 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 KMT5CQ86Y97 462 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 CPNE8Q86YQ8 564 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 VSTM4Q8IW00 320 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 TTC30BQ8N4P2 665 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 GALNT6Q8NCL4 622 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 DTX3LQ8TDB6 740 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 HEXDCQ8WVB3 486 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 FCRL4Q96PJ5 515 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 TWSG1Q9GZX9 223 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 APMAPQ9HDC9 416 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 ZNF71Q9NQZ8 489 aaPredicted RBP13□□□□□ -0.33
CLSTN3-205ENST00000535452 SOHLH2Q9NX45 425 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 CRLS1Q9UJA2 301 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 ACSL5Q9ULC5 683 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 NENFQ9UMX5 172 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 HEBP2Q9Y5Z4 205 aa13□□□□□ -0.33
CLSTN3-205ENST00000535452 GOLGA6L9A6NEM1 432 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 OR2AG2A6NM03 316 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 C21orf140B9A014 251 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 F8W8V4 182 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 TERTO14746 1132 aaKnown RBP12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 ITGB6P18564 788 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 WT1P19544 449 aaPredicted RBP12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 FECHP22830 423 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 NDUFS1P28331 727 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 HADHAP40939 763 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 CASRP41180 1078 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 KLRB1Q12918 225 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 ERV3-1Q14264 604 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 SLC1A5Q15758 541 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 ASTE1Q2TB18 679 aaPredicted RBP12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 SIRPB2Q5JXA9 342 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 FNBP1LQ5T0N5 605 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 TMEM220Q6QAJ8 160 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 DAAM2Q86T65 1068 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 CDKL3Q8IVW4 592 aaPredicted RBP12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 TXLNBQ8N3L3 684 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 EFCAB3Q8N7B9 438 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 ZFPM2Q8WW38 1151 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 N4BP2L2Q92802 583 aaPredicted RBP12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 ULK4Q96C45 1275 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 FCRL5Q96RD9 977 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 CHP1Q99653 195 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 TRIM5Q9C035 493 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 RAB33BQ9H082 229 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 ASB8Q9H765 288 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 ZNF624Q9P2J8 865 aaPredicted RBP12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 EPHA6Q9UF33 1036 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 CROTQ9UKG9 612 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 MAN2B2Q9Y2E5 1009 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 ADGRG1Q9Y653 693 aa12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 HELZ2Q9BYK8 2649 aaKnown RBP12.99□□□□□ -0.33
CLSTN3-205ENST00000535452 CDC14CA4D256 554 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 C5orf60A6NFR6 353 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 C3orf70A6NLC5 250 aaPredicted RBP12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 MATN2O00339 956 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 IFRD1O00458 451 aaPredicted RBP12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 SPAG6O75602 509 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 RFPL1O75677 317 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 PRAMEF1O95521 474 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 DLGAP3O95886 979 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 FGF5P12034 268 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 NELFEP18615 380 aaKnown RBP12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 ITGALP20701 1170 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 LPOP22079 712 aaPredicted RBP12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 CDKN2BP42772 138 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 LEPRP48357 1165 aaKnown RBP12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 ARSDP51689 593 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 HSD11B2P80365 405 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 IHHQ14623 411 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 CHRNA6Q15825 494 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 TMEM126BQ8IUX1 230 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 KATNAL2Q8IYT4 538 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 RNF214Q8ND24 703 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 DDHD1Q8NEL9 900 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 ZNF398Q8TD17 642 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 RSC1A1Q92681 617 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 C12orf66Q96MD2 445 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 CCM2Q9BSQ5 444 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 GPR87Q9BY21 358 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 IL26Q9NPH9 171 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 HRASLS2Q9NWW9 162 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 SCHIP1Q9P0W5 487 aaPredicted RBP12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 SLC23A2Q9UGH3 650 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 PSMD13Q9UNM6 376 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 HYOU1Q9Y4L1 999 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 PCYT1BQ9Y5K3 369 aaPredicted RBP12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 ALG6Q9Y672 507 aa12.98□□□□□ -0.33
CLSTN3-205ENST00000535452 SLC30A1Q9Y6M5 507 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms