RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	BTBD6	Q96KE9	485 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	FCRL4	Q96PJ5	515 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	NUP85	Q9BW27	656 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZFYVE1	Q9HBF4	777 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	MAGEE1	Q9HCI5	957 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	SLC40A1	Q9NP59	571 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	KLC4	Q9NSK0	619 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	SEMA5B	Q9P283	1151 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	LCMT1	Q9UIC8	334 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	SLC30A1	Q9Y6M5	507 aa		11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZFC3H1	O60293	1989 aa	Known RBP	11.36	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZNF487	B1APH4	448 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	KMO	O15229	486 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	VEGFD	O43915	354 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	VIP	P01282	170 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	MT-ND3	P03897	115 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZNF7	P17097	686 aa	Predicted RBP	11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	DLST	P36957	453 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	MAGEA1	P43355	309 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	MAPK9	P45984	424 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	GFER	P55789	205 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	IFI35	P80217	286 aa	Predicted RBP	11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	FOXM1	Q08050	763 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	SLC10A2	Q12908	348 aa	Predicted RBP	11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	SLC14A2	Q15849	920 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	ATP13A4	Q4VNC1	1196 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	CYB5D1	Q6P9G0	228 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	APLF	Q8IW19	511 aa	Predicted RBP	11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	CCDC13	Q8IYE1	715 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	TRAM1L1	Q8N609	369 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	PQLC3	Q8N755	202 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	CNTD1	Q8N815	330 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	GPR26	Q8NDV2	337 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	DTX3L	Q8TDB6	740 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	GLYATL1	Q969I3	302 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	TADA1	Q96BN2	335 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	TRIB3	Q96RU7	358 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	SRPK1	Q96SB4	655 aa	Known RBP	11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	TIMM29	Q9BSF4	260 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	OR2AG1	Q9H205	316 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	POT1	Q9NUX5	634 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	DDX56	Q9NY93	547 aa	Known RBP	11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	DTL	Q9NZJ0	730 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	SLC23A2	Q9UGH3	650 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	KLHL3	Q9UH77	587 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	POLH	Q9Y253	713 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	TP53TG5	Q9Y2B4	290 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	PCDHA13	Q9Y5I0	950 aa		11.35	□□□□□ -0.59
CTNND1-238	ENST00000534647	USP9X	Q93008	2570 aa	Predicted RBP	11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647		A0A087X0T9	212 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	C21orf140	B9A014	251 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	KCNJ13	O60928	360 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	CREG1	O75629	220 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	MTA2	O94776	668 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	LCA5L	O95447	670 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	JCHAIN	P01591	159 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	KRT7	P08729	469 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	FAM228B	P0C875	321 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZNF28	P17035	718 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	AMD1	P17707	334 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	CD86	P42081	329 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	TERF1	P54274	439 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	PMS2	P54278	862 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	GBE1	Q04446	702 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	PPID	Q08752	370 aa	Known RBP	11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	SLC18A3	Q16572	532 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZNF569	Q5MCW4	686 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	ATP1A1-AS1	Q5TC04	95 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	ALKBH5	Q6P6C2	394 aa	Known RBP	11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	LRRTM4	Q86VH4	590 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	VSIG1	Q86XK7	387 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZNF547	Q8IVP9	402 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	GALNT6	Q8NCL4	622 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	SEC14L1	Q92503	715 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	IMP4	Q96G21	291 aa	Known RBP	11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZDHHC12	Q96GR4	267 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	OR6C1	Q96RD1	312 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	SPATA16	Q9BXB7	569 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	NEUROD4	Q9HD90	331 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	CROT	Q9UKG9	612 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	PADI1	Q9ULC6	663 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	GUCA1B	Q9UMX6	200 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	PLAA	Q9Y263	795 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	REXO2	Q9Y3B8	237 aa	Known RBP	11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	TTLL3	Q9Y4R7	772 aa		11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647	MRPS18B	Q9Y676	258 aa	Known RBP	11.34	□□□□□ -0.59
CTNND1-238	ENST00000534647		K7EM74	188 aa		11.33	□□□□□ -0.6
CTNND1-238	ENST00000534647	PPP1R12A	O14974	1030 aa	Predicted RBP	11.33	□□□□□ -0.6
CTNND1-238	ENST00000534647	SPAG6	O75602	509 aa		11.33	□□□□□ -0.6
CTNND1-238	ENST00000534647	RFPL1	O75677	317 aa		11.33	□□□□□ -0.6
CTNND1-238	ENST00000534647	KIAA0754	O94854	1291 aa		11.33	□□□□□ -0.6
CTNND1-238	ENST00000534647	PROSC	O94903	275 aa		11.33	□□□□□ -0.6
CTNND1-238	ENST00000534647	FURIN	P09958	794 aa		11.33	□□□□□ -0.6
CTNND1-238	ENST00000534647	BRAF	P15056	766 aa		11.33	□□□□□ -0.6
CTNND1-238	ENST00000534647	TYRP1	P17643	537 aa		11.33	□□□□□ -0.6
CTNND1-238	ENST00000534647	NELFE	P18615	380 aa	Known RBP	11.33	□□□□□ -0.6
CTNND1-238	ENST00000534647	IDS	P22304	550 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms