RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 CTSEP14091 401 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 GAP43P17677 238 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 CD82P27701 267 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 SOX5P35711 763 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 IGFALSP35858 605 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 NNMTP40261 264 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 GCLMP48507 274 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 SLC11A2P49281 568 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 HK3P52790 923 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 THOP1P52888 689 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 PLK1P53350 603 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 RAD23BP54727 409 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 C21orf58P58505 322 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 RPS21P63220 83 aaKnown RBP2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 PITX1P78337 314 aaPredicted RBP2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 CDK18Q07002 472 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 ADIGQ0VDE8 80 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 RAPSNQ13702 412 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 ARHGEF7Q14155 803 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 ANKRD1Q15327 319 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 ALG11Q2TAA5 492 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 GOLGA7BQ2TAP0 167 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 CATSPEREQ5SY80 951 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 FAM69BQ5VUD6 431 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 SYPL2Q5VXT5 272 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 RRAGBQ5VZM2 374 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 ANKRD40Q6AI12 368 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 CXorf57Q6NSI4 855 aaKnown RBP2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 JMJD6Q6NYC1 403 aaPredicted RBP2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 FBXL22Q6P050 247 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 PMF1Q6P1K2 205 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 NEK5Q6P3R8 708 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 ENPP7Q6UWV6 458 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 OLFML1Q6UWY5 402 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 LEKR1Q6ZMV7 388 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 DPY19L3Q6ZPD9 716 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 Q71RC1 249 aaPredicted RBP2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 EPM2AIP1Q7L775 607 aaPredicted RBP2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 KDELC2Q7Z4H8 507 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 TAF8Q7Z7C8 310 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 PIM3Q86V86 326 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 CCAR2Q8N163 923 aaKnown RBP2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 ARHGAP18Q8N392 663 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 PPM1KQ8N3J5 372 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 RBMXL3Q8N7X1 1067 aaKnown RBP2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 FAM184AQ8NB25 1140 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 ATP11CQ8NB49 1132 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 XXYLT1Q8NBI6 393 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 FAM46DQ8NEK8 389 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 TMIEQ8NEW7 156 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 GPR156Q8NFN8 814 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 NLGN4YQ8NFZ3 816 aaPredicted RBP2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 OR6K2Q8NGY2 324 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 TAS1R2Q8TE23 839 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 PARD3BQ8TEW8 1205 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 CHAC2Q8WUX2 184 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 PATE1Q8WXA2 126 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 SEMA4DQ92854 862 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 SNRNP40Q96DI7 357 aaKnown RBP2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 RTP4Q96DX8 246 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 ELMO2Q96JJ3 720 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 C5orf34Q96MH7 638 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 WDR92Q96MX6 357 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 CATSPER2Q96P56 530 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 TUBGCP5Q96RT8 1024 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 PSMB7Q99436 277 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 ZSWIM1Q9BR11 485 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 FEM1AQ9BSK4 669 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 EDEM3Q9BZQ6 932 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 UBXN6Q9BZV1 441 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 SUDS3Q9H7L9 328 aaPredicted RBP2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 RCOR3Q9P2K3 495 aaPredicted RBP2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 APPL1Q9UKG1 709 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 OSGIN2Q9Y236 505 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 PLEKHM1Q9Y4G2 1056 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 OR1A2Q9Y585 309 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 PCDHGA3Q9Y5H0 932 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 OR51B4Q9Y5P0 310 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 CLIC4Q9Y696 253 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 MED13LQ71F56 2210 aa2.98□□□□□ -1.93
CHMP4A-208ENST00000534106 MN1Q10571 1320 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ATRQ13535 2644 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 SYNJ2BP-COX16A0A087WUM0 186 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 A0A0D9SEW6 157 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ANKUB1A6NFN9 424 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 TMEM202A6NGA9 273 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ZSCAN5CA6NGD5 496 aaPredicted RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ARGFXA6NJG6 315 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 C16orf96A6NNT2 1141 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 PPM1DO15297 605 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 IRAK2O43187 625 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 EXOC3O60645 756 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 PPP6R2O75170 966 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 RFPL1O75677 317 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 STK17BO94768 372 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 LATS1O95835 1130 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 ASS1P00966 412 aaKnown RBP2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 PRLP01236 227 aa2.97□□□□□ -1.93
CHMP4A-208ENST00000534106 FGF1P05230 155 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms