RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ELMO2Q96JJ3 720 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 RMDN2Q96LZ7 410 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 TGM7Q96PF1 710 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 RUFY1Q96T51 708 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 VAT1Q99536 393 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 TRIM56Q9BRZ2 755 aaKnown RBP9.45□□□□□ -0.9
SSBP3-215ENST00000533946 FSD1LQ9BXM9 530 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 WWP1Q9H0M0 922 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 ASB8Q9H765 288 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 RMI1Q9H9A7 625 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 ETNK1Q9HBU6 452 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 SLC40A1Q9NP59 571 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.45□□□□□ -0.92e-7■□□□□ 10.3
SSBP3-215ENST00000533946 EFR3BQ9Y2G0 817 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 PCDHGA7Q9Y5G6 932 aa9.45□□□□□ -0.9
SSBP3-215ENST00000533946 MRPS18BQ9Y676 258 aaKnown RBP9.45□□□□□ -0.9
SSBP3-215ENST00000533946 IGHV5-51A0A0C4DH38 117 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 TCRBV7S3A2A0A539 114 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 K7ENP7 123 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 MTSS1O43312 755 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 LIASO43766 372 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 DUX1O43812 170 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 VEGFDO43915 354 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 TJP3O95049 919 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 TPBGLP0DKB5 382 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 XRCC1P18887 633 aaPredicted RBP9.44□□□□□ -0.9
SSBP3-215ENST00000533946 LPOP22079 712 aaPredicted RBP9.44□□□□□ -0.9
SSBP3-215ENST00000533946 MC4RP32245 332 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 PREPP48147 710 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 CRADDP78560 199 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 VAC14Q08AM6 782 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 TAF1AQ15573 450 aaPredicted RBP9.44□□□□□ -0.9
SSBP3-215ENST00000533946 MEI1Q5TIA1 1274 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 PRAMEF17Q5VTA0 474 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 INO80CQ6PI98 192 aaPredicted RBP9.44□□□□□ -0.9
SSBP3-215ENST00000533946 LDB1Q86U70 411 aaPredicted RBP9.44□□□□□ -0.9
SSBP3-215ENST00000533946 SLC13A5Q86YT5 568 aaPredicted RBP9.44□□□□□ -0.9
SSBP3-215ENST00000533946 ZNF843Q8N446 348 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 PHC3Q8NDX5 983 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 EXTL1Q92935 676 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 GRAMD1AQ96CP6 724 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 CMKLR1Q99788 373 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 TIMM29Q9BSF4 260 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 TLR10Q9BXR5 811 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 DPH1Q9BZG8 443 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 SIDT1Q9NXL6 827 aaKnown RBP9.44□□□□□ -0.9
SSBP3-215ENST00000533946 SLC39A1Q9NY26 324 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 IMPACTQ9P2X3 320 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 IL17BQ9UHF5 180 aa9.44□□□□□ -0.9
SSBP3-215ENST00000533946 PCSK5Q92824 1860 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 LOC101059948A0A1B0GTJ6 334 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 CCDC162PA2VCL2 907 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 KRT87PA6NCN2 255 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 AGAP14A8MT82 685 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 ATXN7O15265 892 aaPredicted RBP9.43□□□□□ -0.9
SSBP3-215ENST00000533946 CAPN5O15484 640 aaPredicted RBP9.43□□□□□ -0.9
SSBP3-215ENST00000533946 NKX2-8O15522 239 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 OR1I1O60431 355 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 ANXA9O76027 345 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 UBXN7O94888 489 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 VIPP01282 170 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 CTSBP07858 339 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 LIFP15018 202 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 AKT1P31749 480 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 RPL22P35268 128 aaKnown RBP9.43□□□□□ -0.9
SSBP3-215ENST00000533946 TMPRSS3P57727 454 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 SEPT6Q14141 434 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 DBN1Q16643 649 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 PARP6Q2NL67 630 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 FAM69BQ5VUD6 431 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 METRNLQ641Q3 311 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 PDPK2PQ6A1A2 396 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 CCDC81Q6ZN84 652 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 ARHGEF18Q6ZSZ5 1173 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 SLC9B2Q86UD5 537 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 AMZ2Q86W34 360 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 SERPINA9Q86WD7 417 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 LRRC8AQ8IWT6 810 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 CFAP206Q8IYR0 622 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 OR10G6Q8NH81 332 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 LKAAEAR1Q8TD35 194 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 BRSK1Q8TDC3 778 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 RTP4Q96DX8 246 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 AHCYL2Q96HN2 611 aaKnown RBP9.43□□□□□ -0.9
SSBP3-215ENST00000533946 MS4A14Q96JA4 679 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 C9orf72Q96LT7 481 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 TAAR9Q96RI9 348 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 CCNL2Q96S94 520 aaPredicted RBP9.43□□□□□ -0.9
SSBP3-215ENST00000533946 TRABDQ9H4I3 376 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 ARNT2Q9HBZ2 717 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 LUC7LQ9NQ29 371 aaKnown RBP9.43□□□□□ -0.9
SSBP3-215ENST00000533946 HAUS2Q9NVX0 235 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 CIDEBQ9UHD4 219 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 ACSL6Q9UKU0 697 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 PKP3Q9Y446 797 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 PCDHGA4Q9Y5G9 962 aa9.43□□□□□ -0.9
SSBP3-215ENST00000533946 MN1Q10571 1320 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-215ENST00000533946 KIR2DS5A0A0G2JLQ3 304 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 A0A0G2JNG1 304 aa9.42□□□□□ -0.9
SSBP3-215ENST00000533946 MROH6A6NGR9 719 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms