RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 PCDHGC4Q9Y5F7 938 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 LAMA2P24043 3122 aaKnown RBP19.11■□□□□ 0.65
CAPN1-226ENST00000533820 TANC1Q9C0D5 1861 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 SERPINF2P08697 491 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 IL7RP16871 459 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 MATN1P21941 496 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 HTR7P34969 479 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 KCNQ1P51787 676 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 SPIDRQ14159 915 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 IMPG1Q17R60 797 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 GLT6D1Q7Z4J2 308 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 ZC3H7AQ8IWR0 971 aaKnown RBP19.11■□□□□ 0.65
CAPN1-226ENST00000533820 FAM86B1Q8N7N1 296 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 NACC2Q96BF6 587 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 ASB2Q96Q27 587 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 TRIM54Q9BYV2 358 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 NOTOA8MTQ0 251 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 CNOT3O75175 753 aaKnown RBP19.11■□□□□ 0.65
CAPN1-226ENST00000533820 CNPP09543 421 aaKnown RBP19.11■□□□□ 0.65
CAPN1-226ENST00000533820 ITGB6P18564 788 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 MAP4P27816 1152 aaKnown RBP19.11■□□□□ 0.65
CAPN1-226ENST00000533820 ZFP36L2P47974 494 aaKnown RBP19.11■□□□□ 0.65
CAPN1-226ENST00000533820 PSAPL1Q6NUJ1 521 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 FBXO30Q8TB52 745 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 C1orf74Q96LT6 269 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 NSMCE2Q96MF7 247 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 SLC7A5P2Q9GIP4 190 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 EXD2Q9NVH0 621 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 ZMYM5Q9UJ78 669 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 FAM47E-STBD1D6RA91 191 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 UGT1A1P22309 533 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 UGT1A4P22310 534 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 SHMT2P34897 504 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 UGT1A3P35503 534 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 UGT1A5P35504 534 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 HK3P52790 923 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 NRG1Q02297 640 aaPredicted RBP19.1■□□□□ 0.65
CAPN1-226ENST00000533820 C6orf136Q5SQH8 315 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 LGI2Q8N0V4 545 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 TMEM199Q8N511 208 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 ZC3H15Q8WU90 426 aaKnown RBP19.1■□□□□ 0.65
CAPN1-226ENST00000533820 FIG4Q92562 907 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 LINGO1Q96FE5 620 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 ZNF599Q96NL3 588 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 LEF1Q9UJU2 399 aaPredicted RBP19.1■□□□□ 0.65
CAPN1-226ENST00000533820 NOBOXO60393 691 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 FGF1P05230 155 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 TAF10Q12962 218 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 NR1D2Q14995 579 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 ZRANB3Q5FWF4 1079 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 MORN1Q5T089 497 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 IL27RAQ6UWB1 636 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 ATP6V0D2Q8N8Y2 350 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 LPCAT1Q8NF37 534 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 OR10Q1Q8NGQ4 319 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 RHEBL1Q8TAI7 183 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 PROKR1Q8TCW9 393 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 SUSD3Q96L08 255 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 TBCDQ9BTW9 1192 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 CCSER2Q9H7U1 834 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 SMURF2Q9HAU4 748 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 SYTL2Q9HCH5 934 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 UTS2RQ9UKP6 389 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 HTTP42858 3142 aa19.1■□□□□ 0.65
CAPN1-226ENST00000533820 TPD52P55327 224 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-226ENST00000533820 GNA12Q03113 381 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 TBC1D21Q8IYX1 336 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 SCML4Q8N228 414 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 DTWD1Q8N5C7 304 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 TMBIM1Q969X1 311 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 SEPT5Q99719 369 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-226ENST00000533820 FKBPLQ9UIM3 349 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 PCTPQ9UKL6 214 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 NUP214P35658 2090 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-226ENST00000533820 GOLGA8CPA6NN73 597 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 WASH4PA8MWX3 477 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 MAN1A2O60476 641 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 G6PDP11413 515 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 HLA-DPA1P20036 260 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 PBX3P40426 434 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 IL10RBQ08334 325 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 CYP2A13Q16696 494 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 EGFLAMQ63HQ2 1017 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 GPRIN3Q6ZVF9 776 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 BEND5Q7L4P6 421 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 TAS2R42Q7RTR8 314 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 TEX26Q8N6G2 289 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 MDGA1Q8NFP4 955 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 BTN2A3PQ96KV6 586 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 DOCK4Q8N1I0 1966 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 KDM1AO60341 852 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 ESRRBO95718 433 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 GUCA1CO95843 209 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 FCGR1AP12314 374 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 BFSP2Q13515 415 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 NR6A1Q15406 480 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 KCNJ8Q15842 424 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 SGO1Q5FBB7 561 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 GPSM1Q86YR5 675 aa19.09■□□□□ 0.65
CAPN1-226ENST00000533820 METTL6Q8TCB7 284 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms