RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 MED16Q9Y2X0 877 aa18.26■□□□□ 0.51
SMPD1-208ENST00000533123 LRRC72A6NJI9 287 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 K7ESF4 209 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 ZNF217O75362 1048 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 SEMA4FO95754 770 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 LTA4HP09960 611 aaKnown RBP18.25■□□□□ 0.51
SMPD1-208ENST00000533123 CCR3P51677 355 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 DPTQ07507 201 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 WSCD2Q2TBF2 565 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 ZNF765Q7L2R6 523 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 DTX3LQ8TDB6 740 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 MRPL46Q9H2W6 279 aaKnown RBP18.25■□□□□ 0.51
SMPD1-208ENST00000533123 MBNL1Q9NR56 388 aaKnown RBP18.25■□□□□ 0.51
SMPD1-208ENST00000533123 PLXNB3Q9ULL4 1909 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 INPP4BO15327 924 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 SLC31A1O15431 190 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 DLX3O60479 287 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 TRIM13O60858 407 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 MTX2O75431 263 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 RASSF9O75901 435 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 GRK2P25098 689 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 GPR1P46091 355 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 ABCE1P61221 599 aaKnown RBP18.25■□□□□ 0.51
SMPD1-208ENST00000533123 FAM83EQ2M2I3 478 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 RDH11Q8TC12 318 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 SCG3Q8WXD2 468 aaKnown RBP18.25■□□□□ 0.51
SMPD1-208ENST00000533123 TTC1Q99614 292 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 IER2Q9BTL4 223 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 GATA5Q9BWX5 397 aaPredicted RBP18.25■□□□□ 0.51
SMPD1-208ENST00000533123 WSB2Q9NYS7 404 aaPredicted RBP18.25■□□□□ 0.51
SMPD1-208ENST00000533123 CORO1CQ9ULV4 474 aaPredicted RBP18.25■□□□□ 0.51
SMPD1-208ENST00000533123 INVSQ9Y283 1065 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 DNAJC16Q9Y2G8 782 aa18.25■□□□□ 0.51
SMPD1-208ENST00000533123 PFDN6O15212 129 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 PCCBP05166 539 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 CD6P30203 668 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 ARFIP2P53365 341 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 AGERQ15109 404 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 MAP7D1Q3KQU3 841 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 TECRLQ5HYJ1 363 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 GPRC6AQ5T6X5 926 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 TSSK4Q6SA08 328 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 ERP27Q96DN0 273 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 BIRC8Q96P09 236 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 MRPL57Q9BQC6 102 aaKnown RBP18.24■□□□□ 0.51
SMPD1-208ENST00000533123 MYLK2Q9H1R3 596 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 C6orf106Q9H6K1 298 aaPredicted RBP18.24■□□□□ 0.51
SMPD1-208ENST00000533123 FZD3Q9NPG1 666 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 MID2Q9UJV3 735 aa18.24■□□□□ 0.51
SMPD1-208ENST00000533123 IGHV1OR15-9A0A0B4J2B8 117 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 NEMP2A6NFY4 417 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 OXTRP30559 389 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 PTGER3P43115 390 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 CCR10P46092 362 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 LACTB2Q53H82 288 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-208ENST00000533123 AGAP9Q5VTM2 703 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 LIPMQ5VYY2 423 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 CLDN19Q8N6F1 224 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 BTN2A2Q8WVV5 523 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 GLYATL1Q969I3 302 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 ULK4Q96C45 1275 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 LENG8Q96PV6 779 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-208ENST00000533123 COPS8Q99627 209 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 MYOCQ99972 504 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 GPR174Q9BXC1 333 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 PNPOQ9NVS9 261 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 SMOXQ9NWM0 555 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 RAD51BO15315 384 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 RHOBTB1O94844 696 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 SLC25A14O95258 325 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-208ENST00000533123 ZNF37AP17032 561 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-208ENST00000533123 PPARGP37231 505 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-208ENST00000533123 CTSL3PQ5NE16 218 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 ZNF648Q5T619 568 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-208ENST00000533123 LYPLAL1Q5VWZ2 237 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 PNCKQ6P2M8 343 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 MAMSTRQ6ZN01 415 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 NLRP8Q86W28 1048 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 TP53I13Q8NBR0 393 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-208ENST00000533123 LRRC37BQ96QE4 947 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 KLC4Q9NSK0 619 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 KCTD5Q9NXV2 234 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 ZDHHC3Q9NYG2 299 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 GALPQ9UBC7 116 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 CNOT6Q9ULM6 557 aaKnown RBP18.23■□□□□ 0.51
SMPD1-208ENST00000533123 VPS9D1Q9Y2B5 631 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 WDFY4Q6ZS81 3184 aa18.23■□□□□ 0.51
SMPD1-208ENST00000533123 ZNF7P17097 686 aaPredicted RBP18.22■□□□□ 0.51
SMPD1-208ENST00000533123 SCTRP47872 440 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 AQP5P55064 265 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 B4GALNT1Q00973 533 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 DMWDQ09019 674 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 IRF4Q15306 451 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 GALNTL6Q49A17 601 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 KHDC1Q4VXA5 237 aaKnown RBP18.22■□□□□ 0.51
SMPD1-208ENST00000533123 MTDHQ86UE4 582 aaKnown RBP18.22■□□□□ 0.51
SMPD1-208ENST00000533123 TRIM74Q86UV6 250 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 TRIM69Q86WT6 500 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 RBFAQ8N0V3 343 aa18.22■□□□□ 0.51
SMPD1-208ENST00000533123 VPS35Q96QK1 796 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms