RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 HFE2Q6ZVN8 426 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 KLF15Q9UIH9 416 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 RBM7Q9Y580 266 aaKnown RBP14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 M0R2N6 131 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 BPGMP07738 259 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 GRM2Q14416 872 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 LPIN1Q14693 890 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 UBXN11Q5T124 520 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 RCN3Q96D15 328 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 NPAS2Q99743 824 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 PTPN18Q99952 460 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 KCNS3Q9BQ31 491 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 KIFC1Q9BW19 673 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 CALML5Q9NZT1 146 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 LOC100506127A0A0U1RQW1 187 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 IRAK2O43187 625 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 DDX6P26196 483 aaKnown RBP eCLIP14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 CCNFP41002 786 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 PTGER3P43115 390 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 IRGCQ6NXR0 463 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 POMZP3Q6PJE2 187 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 TMEM220Q6QAJ8 160 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 KLHL24Q6TFL4 600 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 GRASPQ7Z6J2 395 aaPredicted RBP14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 SLC44A1Q8WWI5 657 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 AGAP2Q99490 1192 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 CNTN3Q9P232 1028 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 SH3GLB1Q9Y371 365 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 SNPHO15079 494 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 C8GP07360 202 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 TCF4P15884 667 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 ZIK1Q3SY52 487 aaPredicted RBP14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 SLC39A4Q6P5W5 647 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 PIK3C3Q8NEB9 887 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 RELTQ969Z4 430 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 TMEM175Q9BSA9 504 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 KLHL31Q9H511 634 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 DAPK2Q9UIK4 370 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 XKRYO14609 159 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 UBXN7O94888 489 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 NSG1P42857 185 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 RNF19BQ6ZMZ0 732 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 NTPCRQ9BSD7 190 aaKnown RBP14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 CDADC1Q9BWV3 514 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 IPPKQ9H8X2 491 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 CRHR1P34998 444 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 HSPA7P48741 367 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 TEAD2Q15562 447 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 ZSWIM7Q19AV6 140 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 KLHL12Q53G59 568 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 CLEC6AQ6EIG7 209 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 MPP5Q8N3R9 675 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 UBR7Q8N806 425 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 ZNF540Q8NDQ6 660 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 LTBP3Q9NS15 1303 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 FAM163BP0C2L3 166 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 ADSLP30566 484 aaPredicted RBP14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 LBX1P52954 281 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 MAPK12P53778 367 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 C2orf80Q0P641 193 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 TMEM139Q8IV31 216 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 SNRNP27Q8WVK2 155 aaKnown RBP14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 DNASE1L2Q92874 299 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 SUSD3Q96L08 255 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 DCUN1D5Q9BTE7 237 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 CRISPLD1Q9H336 500 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 SRMSQ9H3Y6 488 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 TM7SF2O76062 418 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 TCEA1P23193 301 aaKnown RBP14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 TSTD2Q5T7W7 516 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 SULT1C3Q6IMI6 304 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 OSTM1Q86WC4 334 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 PCDH19Q8TAB3 1148 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 XAGE5Q8WWM1 108 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 TRIB2Q92519 343 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 TAPBPLQ9BX59 468 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 TDRD1Q9BXT4 1180 aaKnown RBP14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 SDCBP2Q9H190 292 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 WDR55Q9H6Y2 383 aaPredicted RBP14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 COPS7AQ9UBW8 275 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 EGFL7Q9UHF1 273 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 TELO2Q9Y4R8 837 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 TOPAZ1Q8N9V7 1692 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 A0A0U1RQF3 1178 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 NRP2O60462 931 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 ANXA4P09525 319 aaPredicted RBP14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 MSX2P35548 267 aaPredicted RBP14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 TAS2R50P59544 299 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 GK5Q6ZS86 529 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 CPSF7Q8N684 471 aaKnown RBP14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 AVL9Q8NBF6 648 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 TOR4AQ9NXH8 423 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 IL36AQ9UHA7 158 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 TLR6Q9Y2C9 796 aa14.62□□□□□ -0.07
PCDHA9-202ENST00000532602 ALPIP09923 528 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 ACAP2Q15057 778 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 NAIF1Q69YI7 327 aaPredicted RBP14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 LIN54Q6MZP7 749 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 AHI1Q8N157 1196 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 RASSF5Q8WWW0 418 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms