RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 OR52B2Q96RD2 323 aa12.12□□□□□ -0.47
CHD7-211ENST00000532149 HIST1H2AJQ99878 128 aa12.12□□□□□ -0.47
CHD7-211ENST00000532149 H2AFJQ9BTM1 129 aa12.12□□□□□ -0.47
CHD7-211ENST00000532149 HGH1Q9BTY7 390 aa12.12□□□□□ -0.47
CHD7-211ENST00000532149 SMG9Q9H0W8 520 aaKnown RBP12.12□□□□□ -0.47
CHD7-211ENST00000532149 LINC00597Q9H2U6 94 aa12.12□□□□□ -0.47
CHD7-211ENST00000532149 VCX3BQ9H321 246 aa12.12□□□□□ -0.47
CHD7-211ENST00000532149 DENND2DQ9H6A0 471 aaPredicted RBP12.12□□□□□ -0.47
CHD7-211ENST00000532149 ZFP14Q9HCL3 533 aa12.12□□□□□ -0.47
CHD7-211ENST00000532149 CYP4F12Q9HCS2 524 aa12.12□□□□□ -0.47
CHD7-211ENST00000532149 MID1IP1Q9NPA3 183 aa12.12□□□□□ -0.47
CHD7-211ENST00000532149 STX18Q9P2W9 335 aaKnown RBP12.12□□□□□ -0.47
CHD7-211ENST00000532149 SLCO3A1Q9UIG8 710 aa12.12□□□□□ -0.47
CHD7-211ENST00000532149 ANGPTL2Q9UKU9 493 aa12.12□□□□□ -0.47
CHD7-211ENST00000532149 NUMBLQ9Y6R0 609 aa12.12□□□□□ -0.47
CHD7-211ENST00000532149 SCN8AQ9UQD0 1980 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 NEMP2A6NFY4 417 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 C1QTNF3-AMACRE9PGA6 284 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 PSMD12O00232 456 aaPredicted RBP12.11□□□□□ -0.47
CHD7-211ENST00000532149 FFAR2O15552 330 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 OR1I1O60431 355 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 SNRPB2P08579 225 aaKnown RBP12.11□□□□□ -0.47
CHD7-211ENST00000532149 ANXA5P08758 320 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 ITGB7P26010 798 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 GGT5P36269 586 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 CTSOP43234 321 aaPredicted RBP12.11□□□□□ -0.47
CHD7-211ENST00000532149 PSMD8P48556 350 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 STK19P49842 368 aaPredicted RBP12.11□□□□□ -0.47
CHD7-211ENST00000532149 SH3BP2P78314 561 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 CREB5Q02930 508 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 PDCD2Q16342 344 aaPredicted RBP12.11□□□□□ -0.47
CHD7-211ENST00000532149 UGT3A2Q3SY77 523 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 VWA5B1Q5TIE3 1220 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 ZFP1Q6P2D0 407 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 PGM2L1Q6PCE3 622 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 ATG14Q6ZNE5 492 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 GPRIN3Q6ZVF9 776 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 Q6ZVU0 165 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 TMEM126BQ8IUX1 230 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 CPNE9Q8IYJ1 553 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 FBXW8Q8N3Y1 598 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 PPFIBP2Q8ND30 876 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 GPR26Q8NDV2 337 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 DDHD1Q8NEL9 900 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 ATL1Q8WXF7 558 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 POP5Q969H6 163 aaKnown RBP12.11□□□□□ -0.47
CHD7-211ENST00000532149 MRPL38Q96DV4 380 aaKnown RBP12.11□□□□□ -0.47
CHD7-211ENST00000532149 FAM161BQ96MY7 647 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 HOPXQ9BPY8 73 aaPredicted RBP12.11□□□□□ -0.47
CHD7-211ENST00000532149 THTPAQ9BU02 230 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 WDR55Q9H6Y2 383 aaPredicted RBP12.11□□□□□ -0.47
CHD7-211ENST00000532149 DYRK4Q9NR20 520 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 LMCD1Q9NZU5 365 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 B4GALT6Q9UBX8 382 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 PTBP2Q9UKA9 531 aaKnown RBP12.11□□□□□ -0.47
CHD7-211ENST00000532149 PCTPQ9UKL6 214 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 NDUFAF1Q9Y375 327 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 WNT6Q9Y6F9 365 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 WASF2Q9Y6W5 498 aa12.11□□□□□ -0.47
CHD7-211ENST00000532149 SCAMP3O14828 347 aaKnown RBP12.1□□□□□ -0.47
CHD7-211ENST00000532149 TULP3O75386 442 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 LEFTY1O75610 366 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 STAMBPO95630 424 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 EBLN1P0CF75 366 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 CYP2A7P20853 494 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 GMPRP36959 345 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 CDKN1CP49918 316 aaPredicted RBP12.1□□□□□ -0.47
CHD7-211ENST00000532149 MTTPP55157 894 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 FOXM1Q08050 763 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 FCHO2Q0JRZ9 810 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 GBX1Q14549 363 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 CCDC6Q16204 474 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 HNRNPA1L2Q32P51 320 aaKnown RBP12.1□□□□□ -0.47
CHD7-211ENST00000532149 CMPK2Q5EBM0 449 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 C10orf62Q5T681 223 aaPredicted RBP12.1□□□□□ -0.47
CHD7-211ENST00000532149 WLSQ5T9L3 541 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 SBSNQ6UWP8 590 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 NPAS3Q8IXF0 933 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 YAF2Q8IY57 180 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.1□□□□□ -0.47
CHD7-211ENST00000532149 MIER2Q8N344 545 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 OR6K2Q8NGY2 324 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 MCOLN3Q8TDD5 553 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 KCNV2Q8TDN2 545 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 TWIST2Q8WVJ9 160 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 DLG3Q92796 817 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 METTL2AQ96IZ6 378 aaKnown RBP12.1□□□□□ -0.47
CHD7-211ENST00000532149 ZSWIM3Q96MP5 696 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 NTMT1Q9BV86 223 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 SLC12A9Q9BXP2 914 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 SLC29A3Q9BZD2 475 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 FBRSQ9HAH7 460 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 EBF2Q9HAK2 575 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 GID8Q9NWU2 228 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 EPS15L1Q9UBC2 864 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 POLG2Q9UHN1 485 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 CDH7Q9ULB5 785 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 DNAJC15Q9Y5T4 150 aa12.1□□□□□ -0.47
CHD7-211ENST00000532149 COPG1Q9Y678 874 aaKnown RBP12.1□□□□□ -0.47
CHD7-211ENST00000532149 NPEPPSL1A6NEC2 478 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms