RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 TM4SF5O14894 197 aa21.92■■□□□ 1.1
LRRK1-208ENST00000532029 SGTAO43765 313 aa21.92■■□□□ 1.1
LRRK1-208ENST00000532029 SNX2O60749 519 aa21.92■■□□□ 1.1
LRRK1-208ENST00000532029 FTH1P02794 183 aa21.92■■□□□ 1.1
LRRK1-208ENST00000532029 FRG1Q14331 258 aaKnown RBP21.92■■□□□ 1.1
LRRK1-208ENST00000532029 CAPN12Q6ZSI9 719 aa21.92■■□□□ 1.1
LRRK1-208ENST00000532029 LRRC6Q86X45 466 aa21.92■■□□□ 1.1
LRRK1-208ENST00000532029 LINC00615Q96LM1 132 aaPredicted RBP21.92■■□□□ 1.1
LRRK1-208ENST00000532029 C9orf72Q96LT7 481 aa21.92■■□□□ 1.1
LRRK1-208ENST00000532029 TSSK1BQ9BXA7 367 aa21.92■■□□□ 1.1
LRRK1-208ENST00000532029 PLAC1Q9HBJ0 212 aa21.92■■□□□ 1.1
LRRK1-208ENST00000532029 SPATS2LQ9NUQ6 558 aaKnown RBP21.92■■□□□ 1.1
LRRK1-208ENST00000532029 INTS10Q9NVR2 710 aaKnown RBP21.92■■□□□ 1.1
LRRK1-208ENST00000532029 NCKIPSDQ9NZQ3 722 aa21.92■■□□□ 1.1
LRRK1-208ENST00000532029 SIRPGQ9P1W8 387 aa21.92■■□□□ 1.1
LRRK1-208ENST00000532029 GULP1Q9UBP9 304 aa21.92■■□□□ 1.1
LRRK1-208ENST00000532029 PRSS21Q9Y6M0 314 aa21.92■■□□□ 1.1
LRRK1-208ENST00000532029 MGAT4DA6NG13 374 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 CBFA2T3O75081 653 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 IDSP22304 550 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 SLC1A2P43004 574 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 RPIAP49247 311 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 EIF3BP55884 814 aaKnown RBP21.91■■□□□ 1.1
LRRK1-208ENST00000532029 DAB2P98082 770 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 CTBP1Q13363 440 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 PTRHD1Q6GMV3 140 aaKnown RBP21.91■■□□□ 1.1
LRRK1-208ENST00000532029 DENND6AQ8IWF6 608 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 FAM181AQ8N9Y4 354 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 OR2L2Q8NH16 312 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 BAHD1Q8TBE0 780 aaPredicted RBP21.91■■□□□ 1.1
LRRK1-208ENST00000532029 ZDHHC1Q8WTX9 485 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 APOLD1Q96LR9 279 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 CCM2Q9BSQ5 444 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 GNPTGQ9UJJ9 305 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 FBXO5Q9UKT4 447 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 NFU1Q9UMS0 254 aa21.91■■□□□ 1.1
LRRK1-208ENST00000532029 GSTA2P09210 222 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 GSTM1P09488 218 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 SLC2A4P14672 509 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 RPS3P23396 243 aaKnown RBP eCLIP21.9■■□□□ 1.1
LRRK1-208ENST00000532029 DUSP3P51452 185 aaPredicted RBP21.9■■□□□ 1.1
LRRK1-208ENST00000532029 GSTM4Q03013 218 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 DMPKQ09013 629 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 MGAT5Q09328 741 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 PROX2Q3B8N5 592 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 TRMT10BQ6PF06 316 aaKnown RBP21.9■■□□□ 1.1
LRRK1-208ENST00000532029 ARL10Q8N8L6 244 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 HM13Q8TCT9 377 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 LPGAT1Q92604 370 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 FBXO6Q9NRD1 293 aaPredicted RBP21.9■■□□□ 1.1
LRRK1-208ENST00000532029 FAM8A1Q9UBU6 413 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 TBC1D29Q9UFV1 150 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 PCDHB1Q9Y5F3 818 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 WDR87Q6ZQQ6 2873 aa21.9■■□□□ 1.1
LRRK1-208ENST00000532029 PDZK1P1A8MUH7 402 aa21.89■■□□□ 1.09
LRRK1-208ENST00000532029 S1PR4O95977 384 aa21.89■■□□□ 1.09
LRRK1-208ENST00000532029 ECHS1P30084 290 aa21.89■■□□□ 1.09
LRRK1-208ENST00000532029 SSTR1P30872 391 aa21.89■■□□□ 1.09
LRRK1-208ENST00000532029 NOVA1P51513 510 aaKnown RBP21.89■■□□□ 1.09
LRRK1-208ENST00000532029 NR0B2Q15466 257 aa21.89■■□□□ 1.09
LRRK1-208ENST00000532029 TRIP6Q15654 476 aaKnown RBP21.89■■□□□ 1.09
LRRK1-208ENST00000532029 OGFOD3Q6PK18 319 aa21.89■■□□□ 1.09
LRRK1-208ENST00000532029 SLC35F3Q8IY50 421 aa21.89■■□□□ 1.09
LRRK1-208ENST00000532029 KYQ8NBH2 561 aa21.89■■□□□ 1.09
LRRK1-208ENST00000532029 P2RY12Q9H244 342 aa21.89■■□□□ 1.09
LRRK1-208ENST00000532029 DLL3Q9NYJ7 618 aa21.89■■□□□ 1.09
LRRK1-208ENST00000532029 ZFATQ9P243 1243 aa21.89■■□□□ 1.09
LRRK1-208ENST00000532029 CRYL1Q9Y2S2 319 aa21.89■■□□□ 1.09
LRRK1-208ENST00000532029 ASCC3Q8N3C0 2202 aaKnown RBP21.89■■□□□ 1.09
LRRK1-208ENST00000532029 CABIN1Q9Y6J0 2220 aa21.89■■□□□ 1.09
LRRK1-208ENST00000532029 CFAP54Q96N23 3096 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 C17orf113A0A1B0GUU1 675 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 H3BMM5 538 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 TNFSF14O43557 240 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 SPAG6O75602 509 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 ESR1P03372 595 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 FMO4P31512 558 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 MPP1Q00013 466 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 NFE2L1Q14494 772 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 SEPT7Q16181 437 aaKnown RBP21.88■■□□□ 1.09
LRRK1-208ENST00000532029 ZNF449Q6P9G9 518 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 KIAA0408Q6ZU52 694 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 C3orf62Q6ZUJ4 267 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 CNTN4Q8IWV2 1026 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 CFAP206Q8IYR0 622 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 C2CD4AQ8NCU7 369 aaPredicted RBP21.88■■□□□ 1.09
LRRK1-208ENST00000532029 ELMO1Q92556 727 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 PANX3Q96QZ0 392 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 CCDC68Q9H2F9 335 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 PRDM8Q9NQV8 689 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 MOCS1Q9NZB8 636 aa21.88■■□□□ 1.09
LRRK1-208ENST00000532029 COL5A1P20908 1838 aaPredicted RBP21.87■■□□□ 1.09
LRRK1-208ENST00000532029 DCDC2BA2VCK2 349 aa21.87■■□□□ 1.09
LRRK1-208ENST00000532029 PRR19A6NJB7 356 aa21.87■■□□□ 1.09
LRRK1-208ENST00000532029 OR5K4A6NMS3 321 aa21.87■■□□□ 1.09
LRRK1-208ENST00000532029 NOBOXO60393 691 aa21.87■■□□□ 1.09
LRRK1-208ENST00000532029 TRIM16O95361 564 aa21.87■■□□□ 1.09
LRRK1-208ENST00000532029 CKMT1AP12532 417 aa21.87■■□□□ 1.09
LRRK1-208ENST00000532029 CEACAM1P13688 526 aa21.87■■□□□ 1.09
LRRK1-208ENST00000532029 F3P13726 295 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms