RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 APOC2P02655 101 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 PRKAR1AP10644 381 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 RBL1P28749 1068 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 CA5AP35218 305 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 CTSCP53634 463 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 SH3BP2P78314 561 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 CDC20Q12834 499 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 IL11RAQ14626 422 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 SPA17Q15506 151 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 GPRC6AQ5T6X5 926 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 CACHD1Q5VU97 1274 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 TMEM220Q6QAJ8 160 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 DAAM2Q86T65 1068 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 KLHL6Q8WZ60 621 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 OR6C1Q96RD1 312 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 HEMGNQ9BXL5 484 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 TRIM4Q9C037 500 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 RAB33BQ9H082 229 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 GBA3Q9H227 469 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 LUC7LQ9NQ29 371 aaKnown RBP16.5■□□□□ 0.23
CPSF1-207ENST00000531727 SMOXQ9NWM0 555 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 IL17BQ9UHF5 180 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 DNMT3AQ9Y6K1 912 aaPredicted RBP16.5■□□□□ 0.23
CPSF1-207ENST00000531727 H7C0C1 242 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 STX7O15400 261 aaKnown RBP16.49■□□□□ 0.23
CPSF1-207ENST00000531727 KIF1CO43896 1103 aaKnown RBP16.49■□□□□ 0.23
CPSF1-207ENST00000531727 ANXA9O76027 345 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 AGTP01019 485 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 ZNF28P17035 718 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 FECHP22830 423 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 ATP5OP48047 213 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 CSRP3P50461 194 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 GEMP55040 296 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 MC1RQ01726 317 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 CRTC2Q53ET0 693 aaPredicted RBP16.49■□□□□ 0.23
CPSF1-207ENST00000531727 IRGCQ6NXR0 463 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 FAM83HQ6ZRV2 1179 aaPredicted RBP16.49■□□□□ 0.23
CPSF1-207ENST00000531727 FAM92BQ6ZTR7 304 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 GPR150Q8NGU9 434 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 STARD8Q92502 1023 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 GORASP1Q9BQQ3 440 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 TRIM5Q9C035 493 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 RPS6KL1Q9Y6S9 549 aa16.49■□□□□ 0.23
CPSF1-207ENST00000531727 SETXQ7Z333 2677 aaKnown RBP16.48■□□□□ 0.23
CPSF1-207ENST00000531727 OR2AG2A6NM03 316 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 FGF5P12034 268 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 OAS2P29728 719 aaKnown RBP16.48■□□□□ 0.23
CPSF1-207ENST00000531727 AKT1P31749 480 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 CYLC1P35663 651 aaPredicted RBP16.48■□□□□ 0.23
CPSF1-207ENST00000531727 COPS2P61201 443 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 NFE2L1Q14494 772 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 RPE65Q16518 533 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 CCDC181Q5TID7 509 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 ITPRIPL1Q6GPH6 555 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 C6orf15Q6UXA7 325 aaPredicted RBP16.48■□□□□ 0.23
CPSF1-207ENST00000531727 RASGRP3Q8IV61 690 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 ZNF398Q8TD17 642 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 ZNF514Q96K75 400 aaPredicted RBP16.48■□□□□ 0.23
CPSF1-207ENST00000531727 FERMT1Q9BQL6 677 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 FICDQ9BVA6 458 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 C10orf88Q9H8K7 445 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 SEMA5BQ9P283 1151 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 PSMD13Q9UNM6 376 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 PCDHA3Q9Y5H8 950 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 ARL5AQ9Y689 179 aa16.48■□□□□ 0.23
CPSF1-207ENST00000531727 GOLGA6L3A6NEY3 463 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 C2orf81A6NN90 581 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 KIAA0754O94854 1291 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 NDUFA10O95299 355 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 PRAMEF1O95521 474 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 NELFEP18615 380 aaKnown RBP16.47■□□□□ 0.23
CPSF1-207ENST00000531727 TCN2P20062 427 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 MSH3P20585 1137 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 LPOP22079 712 aaPredicted RBP16.47■□□□□ 0.23
CPSF1-207ENST00000531727 F8A1P23610 371 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 CTNNA1P35221 906 aaKnown RBP16.47■□□□□ 0.23
CPSF1-207ENST00000531727 PTPN7P35236 360 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 DLSTP36957 453 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 OTUD4Q01804 1114 aaKnown RBP16.47■□□□□ 0.23
CPSF1-207ENST00000531727 PTPRCAPQ14761 206 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 TAF1AQ15573 450 aaPredicted RBP16.47■□□□□ 0.23
CPSF1-207ENST00000531727 LONRF2Q1L5Z9 754 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 FNBP1LQ5T0N5 605 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 METRNLQ641Q3 311 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 CYB5D1Q6P9G0 228 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 KLHL35Q6PF15 583 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 CDKL3Q8IVW4 592 aaPredicted RBP16.47■□□□□ 0.23
CPSF1-207ENST00000531727 GALNT6Q8NCL4 622 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 ACTL9Q8TC94 416 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 RNF31Q96EP0 1072 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 STAMBPL1Q96FJ0 436 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 CALR3Q96L12 384 aaKnown RBP16.47■□□□□ 0.23
CPSF1-207ENST00000531727 EFR3BQ9Y2G0 817 aa16.47■□□□□ 0.23
CPSF1-207ENST00000531727 C5orf60A6NFR6 353 aa16.46■□□□□ 0.23
CPSF1-207ENST00000531727 PJA2O43164 708 aa16.46■□□□□ 0.23
CPSF1-207ENST00000531727 SPAG6O75602 509 aa16.46■□□□□ 0.23
CPSF1-207ENST00000531727 MTHFD1P11586 935 aaKnown RBP16.46■□□□□ 0.23
CPSF1-207ENST00000531727 PBLDP30039 288 aaPredicted RBP16.46■□□□□ 0.23
CPSF1-207ENST00000531727 ADRA1AP35348 466 aa16.46■□□□□ 0.23
CPSF1-207ENST00000531727 PPP1CAP62136 330 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms