RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 GAPDHSO14556 408 aaPredicted RBP11.12□□□□□ -0.63
VPS28-214ENST00000531032 GPR39O43194 453 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 PSTPIP1O43586 416 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 CST8O60676 142 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 MFAP3LO75121 409 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 RECKO95980 971 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 FURINP09958 794 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 NFKB1P19838 968 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 CA5AP35218 305 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 CHRNA4P43681 627 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 CTSCP53634 463 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 PPP1CAP62136 330 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 SLC1A5Q15758 541 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 CHRNA6Q15825 494 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 LDLRAP1Q5SW96 308 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 FAM151BQ6UXP7 276 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 AMZ2Q86W34 360 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 VSTM4Q8IW00 320 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 RASGEF1AQ8N9B8 481 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 GPR150Q8NGU9 434 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 UBXN4Q92575 508 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 RNF31Q96EP0 1072 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 OXNAD1Q96HP4 312 aaPredicted RBP11.12□□□□□ -0.63
VPS28-214ENST00000531032 ELMO2Q96JJ3 720 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 MRGPRX2Q96LB1 330 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 FCRL5Q96RD9 977 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 VAT1Q99536 393 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 SMOXQ9NWM0 555 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 LNPEPQ9UIQ6 1025 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 POLHQ9Y253 713 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 TP53TG5Q9Y2B4 290 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 DNMT3AQ9Y6K1 912 aaPredicted RBP11.12□□□□□ -0.63
VPS28-214ENST00000531032 DOPEY2Q9Y3R5 2298 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 NBASA2RRP1 2371 aa11.12□□□□□ -0.63
VPS28-214ENST00000531032 LRRK2Q5S007 2527 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 GLYATL1P3A0A0U1RQE8 302 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 CLEC18AA5D8T8 446 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 C21orf140B9A014 251 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 SPOPO43791 374 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 UGT1A9O60656 530 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 CREG1O75629 220 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 POP7O75817 140 aaKnown RBP11.11□□□□□ -0.63
VPS28-214ENST00000531032 TIAF1O95411 115 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 MT-ND3P03897 115 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 CCNYL3P0C7X3 344 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 TNNT1P13805 278 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 FOLR1P15328 257 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 UGT1A6P19224 532 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 HLA-DPA1P20036 260 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 UGT1A1P22309 533 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 UGT1A4P22310 534 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 TNNT3P45378 269 aaPredicted RBP11.11□□□□□ -0.63
VPS28-214ENST00000531032 PMS2P54278 862 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 HADHBP55084 474 aaKnown RBP11.11□□□□□ -0.63
VPS28-214ENST00000531032 ADCY2Q08462 1091 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 MPP3Q13368 585 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 TUBB3Q13509 450 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 DNASE1L3Q13609 305 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 ITGA9Q13797 1035 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 ERV3-1Q14264 604 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 IGFBP7Q16270 282 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 RPE65Q16518 533 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 PPP2R5EQ16537 467 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 TFDP3Q5H9I0 405 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 GPRC6AQ5T6X5 926 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 KAZNQ674X7 775 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 TCTN3Q6NUS6 607 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 KLHL35Q6PF15 583 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 CLEC18BQ6UXF7 455 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 SPOCD1Q6ZMY3 1216 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 FAM83HQ6ZRV2 1179 aaPredicted RBP11.11□□□□□ -0.63
VPS28-214ENST00000531032 GLT6D1Q7Z4J2 308 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 ZC3H18Q86VM9 953 aaKnown RBP11.11□□□□□ -0.63
VPS28-214ENST00000531032 KMT5CQ86Y97 462 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 ZNF567Q8N184 647 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 SLC25A41Q8N5S1 370 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 CLEC18CQ8NCF0 446 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 BLOC1S5Q8TDH9 187 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 CT55Q8WUE5 264 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 P3H4Q92791 437 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 FCRL4Q96PJ5 515 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 QKIQ96PU8 341 aaKnown RBP eCLIP11.11□□□□□ -0.63
VPS28-214ENST00000531032 UGT1A7Q9HAW7 530 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 UGT1A10Q9HAW8 530 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 UGT1A8Q9HAW9 530 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 PDE7BQ9NP56 450 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 LHX9Q9NQ69 397 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 KLHL8Q9P2G9 620 aaPredicted RBP11.11□□□□□ -0.63
VPS28-214ENST00000531032 RARRES3Q9UL19 164 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 PADI1Q9ULC6 663 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 PKP3Q9Y446 797 aa11.11□□□□□ -0.63
VPS28-214ENST00000531032 hCG_1818297A0A087WSY0 165 aa11.1□□□□□ -0.63
VPS28-214ENST00000531032 OR5K3A6NET4 321 aa11.1□□□□□ -0.63
VPS28-214ENST00000531032 TLCD2A6NGC4 264 aa11.1□□□□□ -0.63
VPS28-214ENST00000531032 OR2AG2A6NM03 316 aa11.1□□□□□ -0.63
VPS28-214ENST00000531032 HACD1B0YJ81 288 aa11.1□□□□□ -0.63
VPS28-214ENST00000531032 MKRN2OSH3BPM6 223 aa11.1□□□□□ -0.63
VPS28-214ENST00000531032 K7EM74 188 aa11.1□□□□□ -0.63
VPS28-214ENST00000531032 KATNA1O75449 491 aa11.1□□□□□ -0.63
VPS28-214ENST00000531032 MTHFD1P11586 935 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms