RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 C1QTNF8P60827 252 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 UBE3AQ05086 875 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 KEAP1Q14145 624 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 PRPSAP1Q14558 356 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 ANGPT1Q15389 498 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 UGP2Q16851 508 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 UGT3A2Q3SY77 523 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 OTUD3Q5T2D3 398 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-214ENST00000530886 CAPN13Q6MZZ7 669 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-214ENST00000530886 CNSTQ6PJW8 725 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 ANKS3Q6ZW76 656 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 EFL1Q7Z2Z2 1120 aaKnown RBP8.04□□□□□ -1.12
CSDE1-214ENST00000530886 B3GNT8Q7Z7M8 397 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 SYVN1Q86TM6 617 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 PM20D2Q8IYS1 436 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 SAMD14Q8IZD0 417 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-214ENST00000530886 TAGAPQ8N103 731 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 VWA5B2Q8N398 1253 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 LPAR1Q92633 364 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 LRCH3Q96II8 777 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 ZNF670Q9BS34 389 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 TTLL2Q9BWV7 592 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 OSBPL2Q9H1P3 480 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 TASP1Q9H6P5 420 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 ITM2CQ9NQX7 267 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 ADGRE2Q9UHX3 823 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 MAGEL2Q9UJ55 1249 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 COL11A1P12107 1806 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-214ENST00000530886 PDCD11Q14690 1871 aaKnown RBP8.04□□□□□ -1.12
CSDE1-214ENST00000530886 A0A0U1RQS6 177 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 GRXCR2A6NFK2 248 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 OR5F1O95221 314 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 ANGPTL1O95841 491 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 NPPAP01160 153 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 TGFB3P10600 412 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 EVI2BP34910 448 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 MAP2K4P45985 399 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 PPP3CCP48454 512 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 BCAR1P56945 870 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 YWHAEP62258 255 aaKnown RBP8.04□□□□□ -1.12
CSDE1-214ENST00000530886 RBP5P82980 135 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 LAPTM5Q13571 262 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 AANATQ16613 207 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 TMEM135Q86UB9 458 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 DCP1BQ8IZD4 617 aaKnown RBP8.04□□□□□ -1.12
CSDE1-214ENST00000530886 TTLL6Q8N841 843 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 OR52H1Q8NGJ2 320 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 GPR78Q96P69 363 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 DCLRE1CQ96SD1 692 aaKnown RBP8.04□□□□□ -1.12
CSDE1-214ENST00000530886 MRPL57Q9BQC6 102 aaKnown RBP8.04□□□□□ -1.12
CSDE1-214ENST00000530886 SLC22A4Q9H015 551 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 TMEM45AQ9NWC5 275 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 NSMCE4AQ9NXX6 385 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 DNAJB9Q9UBS3 223 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 NUFIP1Q9UHK0 495 aaKnown RBP8.04□□□□□ -1.12
CSDE1-214ENST00000530886 GLS2Q9UI32 602 aa8.04□□□□□ -1.12
CSDE1-214ENST00000530886 OAS3Q9Y6K5 1087 aaKnown RBP8.04□□□□□ -1.12
CSDE1-214ENST00000530886 ZNF236Q9UL36 1845 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 A0A0J9YYE9 177 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 A0A1B0GVM2 712 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 CLRN2A0PK11 232 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 PTGES3LE9PB15 166 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 TFECO14948 347 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 CA12O43570 354 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 RGS10O43665 173 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 AIREO43918 545 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 ERVK-10P10266 1014 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 MTHFD1P11586 935 aaKnown RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 HOXD8P13378 290 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 HOXB6P17509 224 aaKnown RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 MAGP20916 626 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 CPN2P22792 545 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 F8A1P23610 371 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 MGAT1P26572 445 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 PSMB9P28065 219 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 ZNF143P52747 638 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 BLVRAP53004 296 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 GPR85P60893 370 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 POU5F1BQ06416 359 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 SCRN3Q0VDG4 424 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 HYAL2Q12891 473 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 BTBD16Q32M84 506 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 GLYATQ6IB77 296 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 GPAT2Q6NUI2 795 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 TXNDC11Q6PKC3 985 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 FAM83AQ86UY5 434 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 XYLT1Q86Y38 959 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 MICU2Q8IYU8 434 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 YIPF7Q8N8F6 280 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 BCL7CQ8WUZ0 217 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 INTS12Q96CB8 462 aaKnown RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 C1orf74Q96LT6 269 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 NSMCE2Q96MF7 247 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 TSNARE1Q96NA8 513 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 SLC30A2Q9BRI3 323 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 CCDC90BQ9GZT6 254 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 FAM83DQ9H4H8 585 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 DHX35Q9H5Z1 703 aaKnown RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 TRMT13Q9NUP7 481 aaKnown RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 FAM49BQ9NUQ9 324 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms