RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 PLEKHA7Q6IQ23 1121 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 TIGD7Q6NT04 549 aaPredicted RBP10.21□□□□□ -0.77
COPB1-207ENST00000529866 ADGRG6Q86SQ4 1221 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 D2HGDHQ8N465 521 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 CLEC1AQ8NC01 280 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 ST6GALNAC3Q8NDV1 305 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 ANKRD20A12PQ8NF67 263 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 UBE2Q2Q8WVN8 375 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 CPT1BQ92523 772 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 CSPG4P5Q96PW8 444 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 MAP3K3Q99759 626 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 HAUS4Q9H6D7 363 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 ARFGAP3Q9NP61 516 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 LATS2Q9NRM7 1088 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 RAD18Q9NS91 495 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 KCND1Q9NSA2 647 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 ETNK2Q9NVF9 386 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 AMACRQ9UHK6 382 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 PADI2Q9Y2J8 665 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 DIDO1Q9BTC0 2240 aaKnown RBP10.21□□□□□ -0.78
COPB1-207ENST00000529866 TMEM191CA6NGB0 347 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 C9J4A7 227 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 F5H423 210 aaPredicted RBP10.2□□□□□ -0.78
COPB1-207ENST00000529866 CDK14O94921 469 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 ZBTB11O95625 1053 aaPredicted RBP10.2□□□□□ -0.78
COPB1-207ENST00000529866 IGHEP01854 428 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 SKILP12757 684 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 PCK1P35558 622 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 ZNF165P49910 485 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 DRG2P55039 364 aaKnown RBP10.2□□□□□ -0.78
COPB1-207ENST00000529866 DCDC1P59894 354 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 PPP1CAP62136 330 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 DSC2Q02487 901 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 ATP1A4Q13733 1029 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 GTF2H3Q13889 308 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 IQCB1Q15051 598 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 ASIC2Q16515 512 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 ZXDCQ2QGD7 858 aaPredicted RBP10.2□□□□□ -0.78
COPB1-207ENST00000529866 SMTNL2Q2TAL5 461 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 BOLA3Q53S33 107 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 ZNF648Q5T619 568 aaPredicted RBP10.2□□□□□ -0.78
COPB1-207ENST00000529866 ARMC6Q6NXE6 501 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 CAVIN1Q6NZI2 390 aaKnown RBP10.2□□□□□ -0.78
COPB1-207ENST00000529866 POLNQ7Z5Q5 900 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 OOSP2Q86WS3 158 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 TRAPPC5Q8IUR0 188 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 MCEMP1Q8IX19 187 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 DSELQ8IZU8 1212 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 CARFQ8N187 725 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 TTC30BQ8N4P2 665 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 ZADH2Q8N4Q0 377 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.2□□□□□ -0.78
COPB1-207ENST00000529866 TRAM1L1Q8N609 369 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 ZBTB2Q8N680 514 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 GLYATL1Q969I3 302 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 CLIP3Q96DZ5 547 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 FER1L6-AS2Q96M78 137 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 IP6K3Q96PC2 410 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 RANBP9Q96S59 729 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 BPIFA3Q9BQP9 254 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 ADGRE3Q9BY15 652 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 UNKQ9C0B0 810 aaKnown RBP10.2□□□□□ -0.78
COPB1-207ENST00000529866 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.2□□□□□ -0.78
COPB1-207ENST00000529866 SOHLH2Q9NX45 425 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 TRIM10Q9UDY6 481 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 SLC23A2Q9UGH3 650 aa10.2□□□□□ -0.78
COPB1-207ENST00000529866 TNRC6AQ8NDV7 1962 aaKnown RBP10.19□□□□□ -0.78
COPB1-207ENST00000529866 A0A1B0GTH6 734 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 OR5K3A6NET4 321 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 PRSS44E7EML9 344 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 LRRTM2O43300 516 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 PRLP01236 227 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 IL4RP24394 825 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 ITGA3P26006 1051 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 IL1R2P27930 398 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 PRKCIP41743 596 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 GLRBP48167 497 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 MYBPC3Q14896 1274 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 NCF4Q15080 339 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 ZRSR2Q15696 482 aaKnown RBP10.19□□□□□ -0.78
COPB1-207ENST00000529866 GPR19Q15760 415 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 QPCTQ16769 361 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 PLEKHS1Q5SXH7 462 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 SP5Q6BEB4 398 aaPredicted RBP10.19□□□□□ -0.78
COPB1-207ENST00000529866 TXNRD3NBQ6F5E7 133 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 IGFL3Q6UXB1 125 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 GDF7Q7Z4P5 450 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 SYTL1Q8IYJ3 562 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 HSPH1Q92598 858 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 ZNF653Q96CK0 615 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 ZNF501Q96CX3 271 aaPredicted RBP10.19□□□□□ -0.78
COPB1-207ENST00000529866 BARD1Q99728 777 aaKnown RBP10.19□□□□□ -0.78
COPB1-207ENST00000529866 NUP85Q9BW27 656 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 SLC7A5P2Q9GIP4 190 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 ZFYVE1Q9HBF4 777 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 RBM22Q9NW64 420 aaKnown RBP eCLIP10.19□□□□□ -0.78
COPB1-207ENST00000529866 NFKBIL1Q9UBC1 381 aaPredicted RBP10.19□□□□□ -0.78
COPB1-207ENST00000529866 MYO6Q9UM54 1294 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 PCDHGA10Q9Y5H3 936 aa10.19□□□□□ -0.78
COPB1-207ENST00000529866 SCINQ9Y6U3 715 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms