RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ARHGAP8P85298 464 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 GRIK2Q13002 908 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 SRSF5Q13243 272 aaKnown RBP7.81□□□□□ -1.16
SSBP3-211ENST00000528787 CTBP1Q13363 440 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 FZD2Q14332 565 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 SLC29A2Q14542 456 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 KIR2DS5Q14953 304 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 FASTKD3Q14CZ7 662 aaKnown RBP7.81□□□□□ -1.16
SSBP3-211ENST00000528787 TRADDQ15628 312 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 PYCR3Q53H96 274 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 HP1BP3Q5SSJ5 553 aaPredicted RBP7.81□□□□□ -1.16
SSBP3-211ENST00000528787 PLEKHS1Q5SXH7 462 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 AGAP9Q5VTM2 703 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 KLHL35Q6PF15 583 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 DOK6Q6PKX4 331 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 CES3Q6UWW8 571 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 LRIG3Q6UXM1 1119 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 CAPN12Q6ZSI9 719 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 TDRPQ86YL5 185 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 IGDCC3Q8IVU1 814 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 SUMF1Q8NBK3 374 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 LRRN4CLQ8ND94 238 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 SLC44A1Q8WWI5 657 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 INPP5DQ92835 1189 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 PWWP2AQ96N64 755 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 SMIM14Q96QK8 99 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 RBBP8Q99708 897 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 RAB11FIP5Q9BXF6 653 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 TRIM54Q9BYV2 358 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.81□□□□□ -1.16
SSBP3-211ENST00000528787 TXLNGYQ9BZA5 131 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 P2RY12Q9H244 342 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 EPB41L1Q9H4G0 881 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 GAREM1Q9H706 876 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 VIPAS39Q9H9C1 493 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 UGT1A7Q9HAW7 530 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 UGT1A10Q9HAW8 530 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 UGT1A8Q9HAW9 530 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 TMEM9BQ9NQ34 198 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 LATS2Q9NRM7 1088 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 DNAAF2Q9NVR5 837 aaKnown RBP7.81□□□□□ -1.16
SSBP3-211ENST00000528787 POLG2Q9UHN1 485 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 RABGEF1Q9UJ41 708 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 CNOT6Q9ULM6 557 aaKnown RBP7.81□□□□□ -1.16
SSBP3-211ENST00000528787 SUFUQ9UMX1 484 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 VWA7Q9Y334 891 aa7.81□□□□□ -1.16
SSBP3-211ENST00000528787 A0A087X1B8 175 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 A0A1B0GTQ1 180 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 A0A1B0GVT2 93 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 TMEM202A6NGA9 273 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 OR2AG2A6NM03 316 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 H0Y8X5 98 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 SCAMP1O15126 338 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 ATP8B1O43520 1251 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 OPA1O60313 960 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 BANF1O75531 89 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 POP7O75817 140 aaKnown RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 TRIM16O95361 564 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 AHSGP02765 367 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 ITGA2BP08514 1039 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 HIST1H2AGP0C0S8 130 aaPredicted RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 ZNF8P17098 575 aaPredicted RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 HIST1H2ADP20671 130 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 MAP4P27816 1152 aaKnown RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 FMO4P31512 558 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 HSD17B3P37058 310 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 HSD17B2P37059 387 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 GRK6P43250 576 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 IL2P60568 153 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 SP140Q13342 867 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 KRT33BQ14525 404 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 USP10Q14694 798 aaKnown RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 PTPRCAPQ14761 206 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 PTPRRQ15256 657 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 UAP1Q16222 522 aaPredicted RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 ALG11Q2TAA5 492 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 TSNAXIP1Q2TAA8 658 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 KIF19Q2TAC6 998 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 HLA-BQ31612 363 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 AASDHQ4L235 1098 aaPredicted RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 PRRT3Q5FWE3 981 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 ZCCHC8Q6NZY4 707 aaKnown RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 ADGRD1Q6QNK2 874 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 RFLNAQ6ZTI6 216 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 CHST15Q7LFX5 561 aaPredicted RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 RD3Q7Z3Z2 195 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 TAF8Q7Z7C8 310 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 TBC1D1Q86TI0 1168 aaPredicted RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 SLC9B2Q86UD5 537 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 ZC3HC1Q86WB0 502 aaKnown RBP7.8□□□□□ -1.16
SSBP3-211ENST00000528787 TRIM48Q8IWZ4 208 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 PIANPQ8IYJ0 282 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 SLC22A18ASQ8N1D0 253 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 AGGF1Q8N302 714 aaeCLIP7.8□□□□□ -1.162e-6■□□□□ 9.7
SSBP3-211ENST00000528787 GPATCH11Q8N954 259 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 RASGEF1AQ8N9B8 481 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 WDR48Q8TAF3 677 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 GPBAR1Q8TDU6 330 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 ACMSDQ8TDX5 336 aa7.8□□□□□ -1.16
SSBP3-211ENST00000528787 SREK1Q8WXA9 508 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms