RNA–Protein interactions for RNA: ENST00000528455.5

CD44-228, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-228ENST00000528455 CEP192Q8TEP8 1941 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 PLXND1Q9Y4D7 1925 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 TRBV5-4A0A0C4DH59 114 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 GLYATL1P3A0A0U1RQE8 302 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 A0A0U1RQS6 177 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 IGLON5A6NGN9 336 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 TOR1BO14657 336 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 RNGTTO60942 597 aaKnown RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 PAK4O96013 591 aaPredicted RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 GOT2P00505 430 aaKnown RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 AHSGP02765 367 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 HOXC4P09017 264 aaPredicted RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 ERVK-10P10266 1014 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 C6P13671 934 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 GM2AP17900 193 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 CNTFP26441 200 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 TEAD1P28347 426 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 CD6P30203 668 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 MC4RP32245 332 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 TRIM23P36406 574 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 ETV3P41162 512 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 MSH2P43246 934 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 ID4P47928 161 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 LEPRP48357 1165 aaKnown RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 FNTBP49356 437 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 TTPAP49638 278 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 ADPRHP54922 357 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 ADARP55265 1226 aaKnown RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 TMPRSS15P98073 1019 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 SEMG2Q02383 582 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 DNAJC3Q13217 504 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 PWP1Q13610 501 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 SIM2Q14190 667 aaPredicted RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 KBTBD12Q3ZCT8 623 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 LRRC73Q5JTD7 316 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 AARS2Q5JTZ9 985 aaKnown RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 HENMT1Q5T8I9 393 aaKnown RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 LAIR1Q6GTX8 287 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 ANO7Q6IWH7 933 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 PNCKQ6P2M8 343 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 TRMT10BQ6PF06 316 aaKnown RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 AFTPHQ6ULP2 937 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 SLC36A4Q6YBV0 504 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 PRR23BQ6ZRT6 265 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 PTAR1Q7Z6K3 402 aaPredicted RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 ARMC10Q8N2F6 343 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 DCLK2Q8N568 766 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 C2CD4AQ8NCU7 369 aaPredicted RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 BTN2A2Q8WVV5 523 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 SLC44A1Q8WWI5 657 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 CENPTQ96BT3 561 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 ULK4Q96C45 1275 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 AP2M1Q96CW1 435 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 ERLEC1Q96DZ1 483 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 DTD2Q96FN9 168 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 RHOVQ96L33 236 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 VPS35Q96QK1 796 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 CPNE1Q99829 537 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 FAM167BQ9BTA0 163 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 DHRS4Q9BTZ2 278 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 WRAP53Q9BUR4 548 aaKnown RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 ASB8Q9H765 288 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 SUDS3Q9H7L9 328 aaPredicted RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 CATSPERZQ9NTU4 200 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 INTS10Q9NVR2 710 aaKnown RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 ZNF180Q9UJW8 692 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 SMG5Q9UPR3 1016 aaKnown RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 ZFR2Q9UPR6 939 aaKnown RBP7.33□□□□□ -1.24
CD44-228ENST00000528455 PLAAQ9Y263 795 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 IKBKGQ9Y6K9 419 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 SCN8AQ9UQD0 1980 aa7.33□□□□□ -1.24
CD44-228ENST00000528455 ZNF106Q9H2Y7 1883 aaKnown RBP7.32□□□□□ -1.24
CD44-228ENST00000528455 IGHV1OR15-9A0A0B4J2B8 117 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 EXOC1LA0A1B0GW35 172 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 A0A1W2PQU0 124 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 CXorf49A8MYA2 514 aaPredicted RBP7.32□□□□□ -1.24
CD44-228ENST00000528455 POC1B-GALNT4F8VUJ3 575 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 GAPDHSO14556 408 aaPredicted RBP7.32□□□□□ -1.24
CD44-228ENST00000528455 RASGRF2O14827 1237 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 TMPRSS2O15393 492 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 LATO43561 262 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 UGT1A9O60656 530 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 CDH16O75309 829 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 HAUS5O94927 633 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 SEMA4FO95754 770 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 IGHA1P01876 353 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 SHBGP04278 402 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 IVLP07476 585 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 UGT1A6P19224 532 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 ITGALP20701 1170 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 OGNP20774 298 aaKnown RBP7.32□□□□□ -1.24
CD44-228ENST00000528455 CD9P21926 228 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 UGT1A1P22309 533 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 UGT1A4P22310 534 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 PMLP29590 882 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 FOXN2P32314 431 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 SPRP35270 261 aaPredicted RBP7.32□□□□□ -1.24
CD44-228ENST00000528455 UGT1A3P35503 534 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 UGT1A5P35504 534 aa7.32□□□□□ -1.24
CD44-228ENST00000528455 PTGER3P43115 390 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms