RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TIFABQ6ZNK6 161 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 COL26A1Q96A83 441 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 RNF145Q96MT1 663 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 DPEP2Q9H4A9 486 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 CACNA2D2Q9NY47 1150 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 FFAR2O15552 330 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 PI15O43692 258 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 OR4F21O95013 312 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 ATP6V1G2O95670 118 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 LDLRP01130 860 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 CAPN1P07384 714 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 ATP1B2P14415 290 aaPredicted RBP14.88□□□□□ -0.03
USP47-207ENST00000527733 SLC26A3P40879 764 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 CCNFP41002 786 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 RAD23AP54725 363 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 IRX1P78414 480 aaPredicted RBP14.88□□□□□ -0.03
USP47-207ENST00000527733 PTPRCAPQ14761 206 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 INTS11Q5TA45 600 aaKnown RBP14.88□□□□□ -0.03
USP47-207ENST00000527733 Q6ZVL8 140 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 ITFG1Q8TB96 612 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 LCN9Q8WX39 176 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 DLG3Q92796 817 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 BTBD1Q9H0C5 482 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 H2AFY2Q9P0M6 372 aaPredicted RBP14.88□□□□□ -0.03
USP47-207ENST00000527733 EVPLQ92817 2033 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 GNAZP19086 355 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 PTPN5P54829 565 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 SLC18A2Q05940 514 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 HLA-DQA1Q5Y7H0 255 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 LPCAT2Q7L5N7 544 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 C2CD4AQ8NCU7 369 aaPredicted RBP14.88□□□□□ -0.03
USP47-207ENST00000527733 GDPD5Q8WTR4 605 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 ZFYVE19Q96K21 471 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 OR52E6Q96RD3 313 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 TDRD1Q9BXT4 1180 aaKnown RBP14.88□□□□□ -0.03
USP47-207ENST00000527733 DYTNA2CJ06 578 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 NRP2O60462 931 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 KAT7O95251 611 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 FYNP06241 537 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 F7P08709 466 aaPredicted RBP14.88□□□□□ -0.03
USP47-207ENST00000527733 DNAJB1P25685 340 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 FOXN2P32314 431 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 RUNX3Q13761 415 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 PANX1Q96RD7 426 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 OSBPL6Q9BZF3 934 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 CEP44Q9C0F1 390 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 OXSMQ9NWU1 459 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 HCFC1R1Q9NWW0 138 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 SCN3BQ9NY72 215 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 PSAT1Q9Y617 370 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 ADAMTSL1Q8N6G6 1762 aa14.88□□□□□ -0.03
USP47-207ENST00000527733 RECQL5O94762 991 aaPredicted RBP14.87□□□□□ -0.03
USP47-207ENST00000527733 LRATO95237 230 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 ATF6P18850 670 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 PRKAG1P54619 331 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 NRG1Q02297 640 aaPredicted RBP14.87□□□□□ -0.03
USP47-207ENST00000527733 SLC34A1Q06495 639 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 LAPTM5Q13571 262 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 ZNF549Q6P9A3 640 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 BHLHB9Q6PI77 547 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 TMEM135Q86UB9 458 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 NELL1Q92832 810 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 KLF16Q9BXK1 252 aaPredicted RBP14.87□□□□□ -0.03
USP47-207ENST00000527733 KLHL4Q9C0H6 718 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 WBP1LQ9NX94 342 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 LZTS1Q9Y250 596 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 A0A0J9YYE9 177 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 H0YGN5 161 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 K7EPI3 171 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 ERAL1O75616 437 aaKnown RBP14.87□□□□□ -0.03
USP47-207ENST00000527733 IMPDH1P20839 514 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 GLDCP23378 1020 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 PNLIPRP1P54315 467 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 NIPAL4Q0D2K0 466 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 ELAVL3Q14576 367 aaKnown RBP14.87□□□□□ -0.03
USP47-207ENST00000527733 VWA5B1Q5TIE3 1220 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 DPY19L2P1Q6NXN4 242 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 ZCCHC8Q6NZY4 707 aaKnown RBP14.87□□□□□ -0.03
USP47-207ENST00000527733 MED27Q6P2C8 311 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 APCDD1Q8J025 514 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 GSTCDQ8NEC7 633 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 SRFBP1Q8NEF9 429 aaKnown RBP14.87□□□□□ -0.03
USP47-207ENST00000527733 OR6Y1Q8NGX8 325 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 C12orf66Q96MD2 445 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 NUSAP1Q9BXS6 441 aaKnown RBP14.87□□□□□ -0.03
USP47-207ENST00000527733 NFS1Q9Y697 457 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 PIPSLA2A3N6 862 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 KIAA0355O15063 1070 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 KERAO60938 352 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 IL4RP24394 825 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 CTGFP29279 349 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 GRIA2P42262 883 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 CRATP43155 626 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 CYP4F2P78329 520 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 KPNB1Q14974 876 aaKnown RBP14.87□□□□□ -0.03
USP47-207ENST00000527733 GPRC6AQ5T6X5 926 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 NXPE1Q8N323 547 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 ATG16L2Q8NAA4 619 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 PCBD2Q9H0N5 130 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 C2orf71A6NGG8 1288 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms