RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 COPS8Q99627 209 aa25.89■■□□□ 1.74
TSPAN4-217ENST00000527644 FAM96AQ9H5X1 160 aa25.89■■□□□ 1.74
TSPAN4-217ENST00000527644 POT1Q9NUX5 634 aa25.89■■□□□ 1.74
TSPAN4-217ENST00000527644 PISDQ9UG56 409 aa25.89■■□□□ 1.74
TSPAN4-217ENST00000527644 ITPR1Q14643 2758 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 ZSCAN5DPP0CG00 497 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 THRAP10827 490 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 PSMA3P25788 255 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 HALP42357 657 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 SKIDA1Q1XH10 827 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 BCL7AQ4VC05 210 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 TMEM26Q6ZUK4 368 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 GSTA5Q7RTV2 222 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 REXO1L1PQ8IX06 675 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 RBM12BQ8IXT5 1001 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 ANP32BQ92688 251 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 ZMYND15Q9H091 742 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 PDP2Q9P2J9 529 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 WDR37Q9Y2I8 494 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 FAM208BQ5VWN6 2430 aa25.88■■□□□ 1.73
TSPAN4-217ENST00000527644 TRBV5-4A0A0C4DH59 114 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 MGAT4DA6NG13 374 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 CFAP99D6REC4 459 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 CLCA4Q14CN2 919 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 ZRANB3Q5FWF4 1079 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 SPACA3Q8IXA5 215 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 BEND7Q8N7W2 519 aaPredicted RBP25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 RCBTB1Q8NDN9 531 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 KCNE4Q8WWG9 221 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 CXorf40BQ96DE9 158 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 PBKQ96KB5 322 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 LINC00615Q96LM1 132 aaPredicted RBP25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 TBC1D10AQ9BXI6 508 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 DPH1Q9BZG8 443 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 ZDHHC3Q9NYG2 299 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 TMEM9Q9P0T7 183 aa25.87■■□□□ 1.73
TSPAN4-217ENST00000527644 HEATR9A2RTY3 570 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 OR52A4PA6NMU1 304 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 AGRPO00253 132 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 APRTP07741 180 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 ATP1B2P14415 290 aaPredicted RBP25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 ITIH1P19827 911 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 MPSTP25325 297 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 KCNJ1P48048 391 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 CACNG1Q06432 222 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 NFE2L1Q14494 772 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 METRNLQ641Q3 311 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 FAM83HQ6ZRV2 1179 aaPredicted RBP25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 OR2L2Q8NH16 312 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 NCSTNQ92542 709 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 NAF1Q96HR8 494 aaKnown RBP25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 KCNF1Q9H3M0 494 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 SLC40A1Q9NP59 571 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 CASS4Q9NQ75 786 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 ZFYVE26Q68DK2 2539 aa25.86■■□□□ 1.73
TSPAN4-217ENST00000527644 NVLO15381 856 aaKnown RBP25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 SGTAO43765 313 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 ACRV1P26436 265 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 PBLDP30039 288 aaPredicted RBP25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 SLC5A2P31639 672 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 GRIA1P42261 906 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 MAPK9P45984 424 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 CCDC38Q502W7 563 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 TAS2R42Q7RTR8 314 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 SERPINA9Q86WD7 417 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 JAMLQ86YT9 394 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 RASGEF1CQ8N431 466 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 PRELID2Q8N945 189 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 AGBL5Q8NDL9 886 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 RANBP9Q96S59 729 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 EIF2B3Q9NR50 452 aaKnown RBP25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 ACSL5Q9ULC5 683 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 RIMKLBQ9ULI2 386 aa25.85■■□□□ 1.73
TSPAN4-217ENST00000527644 IGLV3-16A0A075B6K0 115 aa25.84■■□□□ 1.73
TSPAN4-217ENST00000527644 ADRA1DP25100 572 aa25.84■■□□□ 1.73
TSPAN4-217ENST00000527644 CSTF2P33240 577 aaKnown RBP eCLIP25.84■■□□□ 1.73
TSPAN4-217ENST00000527644 CDKN1CP49918 316 aaPredicted RBP25.84■■□□□ 1.73
TSPAN4-217ENST00000527644 TLE3Q04726 772 aa25.84■■□□□ 1.73
TSPAN4-217ENST00000527644 B3GNT4Q9C0J1 378 aa25.84■■□□□ 1.73
TSPAN4-217ENST00000527644 ACSL6Q9UKU0 697 aa25.84■■□□□ 1.73
TSPAN4-217ENST00000527644 TTC7AQ9ULT0 858 aaPredicted RBP25.84■■□□□ 1.73
TSPAN4-217ENST00000527644 CCDC78A2IDD5 438 aa25.83■■□□□ 1.73
TSPAN4-217ENST00000527644 MSNP26038 577 aaKnown RBP25.83■■□□□ 1.73
TSPAN4-217ENST00000527644 ETV5P41161 510 aa25.83■■□□□ 1.73
TSPAN4-217ENST00000527644 PRLHRP49683 370 aa25.83■■□□□ 1.73
TSPAN4-217ENST00000527644 MAPK10P53779 464 aa25.83■■□□□ 1.73
TSPAN4-217ENST00000527644 RPE65Q16518 533 aa25.83■■□□□ 1.73
TSPAN4-217ENST00000527644 NLRP9Q7RTR0 991 aa25.83■■□□□ 1.73
TSPAN4-217ENST00000527644 PLXDC1Q8IUK5 500 aa25.83■■□□□ 1.73
TSPAN4-217ENST00000527644 NAT14Q8WUY8 206 aa25.83■■□□□ 1.73
TSPAN4-217ENST00000527644 USP7Q93009 1102 aa25.83■■□□□ 1.73
TSPAN4-217ENST00000527644 PSMD13Q9UNM6 376 aa25.83■■□□□ 1.73
TSPAN4-217ENST00000527644 C17orf113A0A1B0GUU1 675 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 KLK10O43240 276 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 UBXN7O94888 489 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 CCL4P13236 92 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 AMD1P17707 334 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 ARSDP51689 593 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 BASP1P80723 227 aaKnown RBP25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 GPR18Q14330 331 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms