RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 GLYATL1Q969I3 302 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 TTC25Q96NG3 672 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 TSGA13Q96PP4 275 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 NRTNQ99748 197 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 KLHL25Q9H0H3 589 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 ING2Q9H160 280 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 CHST8Q9H2A9 424 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 ZNF768Q9H5H4 540 aaKnown RBP6.45□□□□□ -1.38
CD44-221ENST00000526000 PDE7BQ9NP56 450 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 SLC40A1Q9NP59 571 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 SLAMF7Q9NQ25 335 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 LUC7LQ9NQ29 371 aaKnown RBP6.45□□□□□ -1.38
CD44-221ENST00000526000 FGF21Q9NSA1 209 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 ABHD10Q9NUJ1 306 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 CTTNBP2NLQ9P2B4 639 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 MAP4K5Q9Y4K4 846 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 SPO11Q9Y5K1 396 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 ADGRG1Q9Y653 693 aa6.45□□□□□ -1.38
CD44-221ENST00000526000 MN1Q10571 1320 aaPredicted RBP6.45□□□□□ -1.38
CD44-221ENST00000526000 ESPL1Q14674 2120 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 A0A087X0T9 212 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 UBA6A0AVT1 1052 aaPredicted RBP6.44□□□□□ -1.38
CD44-221ENST00000526000 OR6C74A6NCV1 312 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 OR2AG2A6NM03 316 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 TCP11X1B4DZS4 312 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 MT-CYBP00156 380 aaPredicted RBP6.44□□□□□ -1.38
CD44-221ENST00000526000 CYP1A2P05177 515 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 ANKRD34CP0C6C1 535 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 FAM228BP0C875 321 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 POLR2CP19387 275 aaPredicted RBP6.44□□□□□ -1.38
CD44-221ENST00000526000 FECHP22830 423 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 KDELR1P24390 212 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 PTPN4P29074 926 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 CTSCP53634 463 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 DYNLT1P63172 113 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 PDE1BQ01064 536 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 TMEM115Q12893 351 aaPredicted RBP6.44□□□□□ -1.38
CD44-221ENST00000526000 GPS2Q13227 327 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 GTF2H3Q13889 308 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 NFE2L1Q14494 772 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 MESDQ14696 234 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 PLCL1Q15111 1095 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 CHRNA6Q15825 494 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 RPE65Q16518 533 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 KYNUQ16719 465 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.44□□□□□ -1.38
CD44-221ENST00000526000 DNTTIP2Q5QJE6 756 aaKnown RBP6.44□□□□□ -1.38
CD44-221ENST00000526000 CCDC70Q6NSX1 233 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 DUS1LQ6P1R4 473 aaKnown RBP6.44□□□□□ -1.38
CD44-221ENST00000526000 ABRAXAS1Q6UWZ7 409 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 MICALCLQ6ZW33 695 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 TMTC1Q8IUR5 882 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 TMEM126BQ8IUX1 230 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 LRRC49Q8IUZ0 686 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 SRRM1Q8IYB3 904 aaKnown RBP6.44□□□□□ -1.38
CD44-221ENST00000526000 CISD2Q8N5K1 135 aaKnown RBP6.44□□□□□ -1.38
CD44-221ENST00000526000 TRAM1L1Q8N609 369 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 BEND7Q8N7W2 519 aaPredicted RBP6.44□□□□□ -1.38
CD44-221ENST00000526000 TC2NQ8N9U0 490 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 SLC38A9Q8NBW4 561 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 GALNT11Q8NCW6 608 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 RNF25Q96BH1 459 aaPredicted RBP6.44□□□□□ -1.38
CD44-221ENST00000526000 TRIM11Q96F44 468 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 PDLIM2Q96JY6 352 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 LYSMD1Q96S90 227 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 ADGRE3Q9BY15 652 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 EPB41L1Q9H4G0 881 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 KCND1Q9NSA2 647 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 IMP3Q9NV31 184 aaKnown RBP6.44□□□□□ -1.38
CD44-221ENST00000526000 HRASLS2Q9NWW9 162 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 SOHLH2Q9NX45 425 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 DNPEPQ9ULA0 475 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 ZNF711Q9Y462 761 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 BOD1L1Q8NFC6 3051 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 LRRK2Q5S007 2527 aa6.44□□□□□ -1.38
CD44-221ENST00000526000 TNRC6AQ8NDV7 1962 aaKnown RBP6.44□□□□□ -1.38
CD44-221ENST00000526000 USP9YO00507 2555 aaPredicted RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 SPTBN1Q01082 2364 aaKnown RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 LRRD1A4D1F6 860 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 RGSL1A5PLK6 1076 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 SLC9B1P1A6NJY1 282 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 CHUKO15111 745 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 VEGFDO43915 354 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 SCRG1O75711 98 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 IPO7O95373 1038 aaKnown RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 MT-ND3P03897 115 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 MX2P20592 715 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 CYLC1P35663 651 aaPredicted RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 HALP42357 657 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 CHRNA4P43681 627 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 CAPZBP47756 277 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 FOXL2P58012 376 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 RPL26P61254 145 aaKnown RBP6.43□□□□□ -1.38
CD44-221ENST00000526000 ACY1Q03154 408 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 CDK18Q07002 472 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 XRCC4Q13426 336 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 KRT33BQ14525 404 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 PPP2R5EQ16537 467 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 UGT8Q16880 541 aa6.43□□□□□ -1.38
CD44-221ENST00000526000 PTCHD3Q3KNS1 767 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms