RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 A0A0B4J293 547 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 LY6G6EA0A0G2JKS1 128 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 MYMKA6NI61 221 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 J3KR12 359 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 SLC30A4O14863 429 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 IFIT3O14879 490 aaKnown RBP4.47□□□□□ -1.69
CSDE1-211ENST00000525970 LDB2O43679 373 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 PRAMEF11O60813 436 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 KINO60870 393 aaKnown RBP4.47□□□□□ -1.69
CSDE1-211ENST00000525970 ZNF217O75362 1048 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 G6PDP11413 515 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 PTPN3P26045 913 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 PCGF2P35227 344 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 PRKCIP41743 596 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 RASSF2P50749 326 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 AP1B1Q10567 949 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 ITGA7Q13683 1181 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 EFNB3Q15768 340 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 ZNF260Q3ZCT1 412 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 ANKRD20A4Q4UJ75 823 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 ANKRD20A8PQ5CZ79 823 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 GLRA4Q5JXX5 417 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 ANKRD20A2Q5SQ80 823 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 ANKRD20A1Q5TYW2 823 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 ANKRD20A3Q5VUR7 823 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 FRG2Q64ET8 278 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 RUSC1-AS1Q66K80 236 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 C15orf39Q6ZRI6 1047 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 COLCA1Q6ZS62 124 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 PIP4P1Q86T03 277 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 CCDC190Q86UF4 302 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 PIM3Q86V86 326 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 ZDHHC17Q8IUH5 632 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 FBXO39Q8N4B4 442 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 SPC24Q8NBT2 197 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 ATAD1Q8NBU5 361 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 MPLKIPQ8TAP9 179 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 WDR20Q8TBZ3 569 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 EXT2Q93063 718 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 NXNL1Q96CM4 212 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 PDLIM5Q96HC4 596 aaKnown RBP4.47□□□□□ -1.69
CSDE1-211ENST00000525970 RMDN2Q96LZ7 410 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 ZNF558Q96NG5 402 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 MS4A10Q96PG2 267 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 FERMT1Q9BQL6 677 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 MMADHCQ9H3L0 296 aaPredicted RBP4.47□□□□□ -1.69
CSDE1-211ENST00000525970 FZD8Q9H461 694 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 MRPL44Q9H9J2 332 aaKnown RBP4.47□□□□□ -1.69
CSDE1-211ENST00000525970 LEF1Q9UJU2 399 aaPredicted RBP4.47□□□□□ -1.69
CSDE1-211ENST00000525970 TTC7AQ9ULT0 858 aaPredicted RBP4.47□□□□□ -1.69
CSDE1-211ENST00000525970 PCDHA12Q9UN75 941 aa4.47□□□□□ -1.69
CSDE1-211ENST00000525970 CNTNAP2Q9UHC6 1331 aa4.46□□□□□ -1.69
CSDE1-211ENST00000525970 EIF4E1BA6NMX2 242 aaKnown RBP4.46□□□□□ -1.7
CSDE1-211ENST00000525970 HEPACAM2A8MVW5 462 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 H3BNX3 289 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 IPO8O15397 1037 aaKnown RBP4.46□□□□□ -1.7
CSDE1-211ENST00000525970 NDUFS4O43181 175 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 EGFP01133 1207 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 SNRNP70P08621 437 aaKnown RBP4.46□□□□□ -1.7
CSDE1-211ENST00000525970 FAM58BPP0C7Q3 252 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 THEGLP0DJG4 465 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 PDGFRAP16234 1089 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 STMN1P16949 149 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 UGT1A1P22309 533 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 HRH2P25021 359 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 PSMA3P25788 255 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 CDC25CP30307 473 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 HSPA4P34932 840 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 MATR3P43243 847 aaKnown RBP eCLIP4.46□□□□□ -1.7
CSDE1-211ENST00000525970 CSNK2A1P68400 391 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-211ENST00000525970 GAD2Q05329 585 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 ACTN3Q08043 901 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-211ENST00000525970 COASYQ13057 564 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 KRT33BQ14525 404 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 MELKQ14680 651 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 LASP1Q14847 261 aaKnown RBP4.46□□□□□ -1.7
CSDE1-211ENST00000525970 TWIST1Q15672 202 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 SMU1Q2TAY7 513 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 ZNF284Q2VY69 593 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 PPP6R3Q5H9R7 873 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-211ENST00000525970 Q5PR19 223 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 RNASEH2BQ5TBB1 312 aaKnown RBP4.46□□□□□ -1.7
CSDE1-211ENST00000525970 FAM109BQ6ICB4 259 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-211ENST00000525970 B3GNT6Q6ZMB0 384 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 ZNF534Q76KX8 674 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 MFN1Q8IWA4 741 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 TUSC5Q8IXB3 177 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 C10orf53Q8N6V4 93 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 CSNK2A3Q8NEV1 391 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 SPATA3Q8NHX4 192 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 ROBO4Q8WZ75 1007 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 TRIB2Q92519 343 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 KRT35Q92764 455 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 TAAR8Q969N4 342 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 ERLEC1Q96DZ1 483 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 MUS81Q96NY9 551 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 SMC6Q96SB8 1091 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 ATP6V0BQ99437 205 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 EBF3Q9H4W6 596 aa4.46□□□□□ -1.7
CSDE1-211ENST00000525970 TASP1Q9H6P5 420 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms