RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 PHPT1Q9NRX4 125 aaPredicted RBP6.39□□□□□ -1.39
CD44-214ENST00000525211 SPATS2LQ9NUQ6 558 aaKnown RBP6.39□□□□□ -1.39
CD44-214ENST00000525211 DNAJC28Q9NX36 388 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 SCHIP1Q9P0W5 487 aaPredicted RBP6.39□□□□□ -1.39
CD44-214ENST00000525211 CTNNAL1Q9UBT7 734 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 FAM8A1Q9UBU6 413 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 KLQ9UEF7 1012 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 CRLS1Q9UJA2 301 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 GMEB2Q9UKD1 530 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 APPL1Q9UKG1 709 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 IKZF3Q9UKT9 509 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 SLC6A14Q9UN76 642 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 KCNK6Q9Y257 313 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 WDR37Q9Y2I8 494 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 MTO1Q9Y2Z2 717 aaKnown RBP6.39□□□□□ -1.39
CD44-214ENST00000525211 RIF1Q5UIP0 2472 aaKnown RBP6.39□□□□□ -1.39
CD44-214ENST00000525211 ASCC3Q8N3C0 2202 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 TRBV23OR9-2A0A075B6M9 112 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 LY6G6EA0A0G2JKS1 128 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 UBA6A0AVT1 1052 aaPredicted RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 AP3B1O00203 1094 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 CACNB4O00305 520 aaPredicted RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 TRIM38O00635 465 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 GRID2O43424 1007 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 NUAK1O60285 661 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 LILRA1O75019 489 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 POP7O75817 140 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 PIAS2O75928 621 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 CDK14O94921 469 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 CSF2P04141 144 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 IVLP07476 585 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 ZNF806P0C7X5 589 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 ACP5P13686 325 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 ATP1B2P14415 290 aaPredicted RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 BRAFP15056 766 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 DGKAP23743 735 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 PDHA2P29803 388 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 CCR7P32248 378 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 NUDT1P36639 197 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 HSD17B3P37058 310 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 PREPP48147 710 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 AFF3P51826 1226 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 HK3P52790 923 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 CSE1LP55060 971 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 EIF3BP55884 814 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 YPEL5P62699 121 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 PDE1BQ01064 536 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 CTBSQ01459 385 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 MGAT5Q09328 741 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 BMPR2Q13873 1038 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 FRG1Q14331 258 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 NFE2L1Q14494 772 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 SLC29A2Q14542 456 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 SWI5Q1ZZU3 235 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 DEFB133Q30KQ1 61 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 GPR33Q49SQ1 333 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 FASTKD1Q53R41 847 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 PDPK2PQ6A1A2 396 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 CHST15Q7LFX5 561 aaPredicted RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 NLRP9Q7RTR0 991 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 ALYREFQ86V81 257 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 C11orf74Q86VG3 221 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 IQCHQ86VS3 1027 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 ZC3HC1Q86WB0 502 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 PHYKPLQ8IUZ5 450 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 CEP97Q8IW35 865 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 PALM2Q8IXS6 379 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 RAVER1Q8IY67 606 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 CYP4X1Q8N118 509 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 MINDY1Q8N5J2 469 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 OTUD6BQ8N6M0 293 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 PPM1NQ8N819 430 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 LMX1AQ8TE12 382 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 DCAKDQ8WVC6 231 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 PEX13Q92968 403 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 ELF4Q99607 663 aaPredicted RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 COPS8Q99627 209 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 PRRX2Q99811 253 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 C19orf43Q9BQ61 176 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 GTPBP2Q9BX10 602 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 C1QTNF7Q9BXJ2 289 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 FUT8Q9BYC5 575 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 FOXP3Q9BZS1 431 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 PHACTR1Q9C0D0 580 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 CARS2Q9HA77 564 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 SEMA4GQ9NTN9 838 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 TBC1D29Q9UFV1 150 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 MTRF1LQ9UGC7 380 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 ZNHIT2Q9UHR6 403 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 RUVBL2Q9Y230 463 aaKnown RBP6.38□□□□□ -1.39
CD44-214ENST00000525211 CDYLQ9Y232 598 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 DNAJC16Q9Y2G8 782 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 NFS1Q9Y697 457 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 U3KQA8 63 aa6.38□□□□□ -1.39
CD44-214ENST00000525211 GVINP1Q7Z2Y8 2422 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 ARHGEF17Q96PE2 2063 aaPredicted RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 PIKFYVEQ9Y2I7 2098 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 RALGAPA1Q6GYQ0 2036 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 A0A1B0GTQ1 180 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 A6NCN8 305 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms