RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 ABCG8Q9H221 673 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 PRO3102Q9H379 93 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 PAPOLBQ9NRJ5 636 aaKnown RBP4.32□□□□□ -1.72
PCM1-223ENST00000524356 ZBTB40Q9NUA8 1239 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 C20orf141Q9NUB4 165 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 PEMTQ9UBM1 199 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 EXTL2Q9UBQ6 330 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 HPCAL4Q9UM19 191 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 SLC12A4Q9UP95 1085 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 UBE2J1Q9Y385 318 aaPredicted RBP4.32□□□□□ -1.72
PCM1-223ENST00000524356 LIPGQ9Y5X9 500 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TRPM7Q96QT4 1865 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 RTL9Q8NET4 1388 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 ATP8B3O60423 1300 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 SMIM30A4D0T7 59 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 NPIPB13A6NJU9 1138 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 IFITM10A6NMD0 228 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 NPIPB5A8MRT5 1133 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 NPIPB4C9JG80 1138 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 AKR1B15C9JRZ8 316 aaPredicted RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 RIPK2O43353 540 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 TPPPO94811 219 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 GALTP07902 379 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 ZNF8P17098 575 aaPredicted RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 ERCC2P18074 760 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 CASTP20810 708 aaKnown RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 KCNA5P22460 613 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 ADORA2AP29274 412 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 ACAA2P42765 397 aaKnown RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 PSMC4P43686 418 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 MTNR1AP48039 350 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 GCLCP48506 637 aaPredicted RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 PCP4P48539 62 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 HNMTP50135 292 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 GATMP50440 423 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 CAPZA1P52907 286 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 PNLIPRP2P54317 469 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 CASP9P55211 416 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 SH3BGRP55822 239 aaPredicted RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 SRSF1Q07955 248 aaKnown RBP eCLIP4.31□□□□□ -1.72
PCM1-223ENST00000524356 GOLGA8FQ08AF8 430 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 BFSP2Q13515 415 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 TRA2AQ13595 282 aaKnown RBP eCLIP4.31□□□□□ -1.723e-10■■□□□ 14.4
PCM1-223ENST00000524356 RBM20Q5T481 1227 aaKnown RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 C12orf60Q5U649 245 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 FAM171A1Q5VUB5 890 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 LAYNQ6UX15 382 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 TMEM108Q6UXF1 575 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 SLC30A10Q6XR72 485 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 MARK2Q7KZI7 788 aaKnown RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 MAVSQ7Z434 540 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 SPATA19Q7Z5L4 167 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 WDR53Q7Z5U6 358 aaPredicted RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 WDR63Q8IWG1 891 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 FAM109AQ8N4B1 249 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 IQUBQ8NA54 791 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 ATAD1Q8NBU5 361 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 DENND6BQ8NEG7 585 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 NEK9Q8TD19 979 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 GIMAP1Q8WWP7 306 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 CNOT9Q92600 299 aaKnown RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 FAM136AQ96C01 138 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 TRMT61AQ96FX7 289 aaKnown RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 EIF3CQ99613 913 aaKnown RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 SMOQ99835 787 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 TEX13AQ9BXU3 409 aaPredicted RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 DUSP22Q9NRW4 184 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 POT1Q9NUX5 634 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 FBXO28Q9NVF7 368 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 OGFRQ9NZT2 677 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 POLLQ9UGP5 575 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 NDRG4Q9ULP0 352 aaKnown RBP4.31□□□□□ -1.72
PCM1-223ENST00000524356 AURKCQ9UQB9 309 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 CLDN16Q9Y5I7 305 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 SCN11AQ9UI33 1791 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 VCANP13611 3396 aa4.31□□□□□ -1.72
PCM1-223ENST00000524356 MRC1P22897 1456 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 TCRBV21S2A2A0A5A6 115 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 A6NL46 340 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 C2orf81A6NN90 581 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 C17orf100A8MU93 164 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 A8MVJ9 347 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 KAT7O95251 611 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 SIX3O95343 332 aaPredicted RBP4.3□□□□□ -1.72
PCM1-223ENST00000524356 OPN1MWP04001 364 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 ZFYP08048 801 aaPredicted RBP4.3□□□□□ -1.72
PCM1-223ENST00000524356 OPN1MW2P0DN77 364 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 OPN1MW3P0DN78 364 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 ENGP17813 658 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 SP100P23497 879 aaPredicted RBP4.3□□□□□ -1.72
PCM1-223ENST00000524356 LIPAP38571 399 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 CAMPP49913 170 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 KCNJ10P78508 379 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 PPATQ06203 517 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 RUNX2Q13950 521 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 CCNIQ14094 377 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 ZNF273Q14593 569 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 MYLK3Q32MK0 819 aa4.3□□□□□ -1.72
PCM1-223ENST00000524356 AASDHQ4L235 1098 aaPredicted RBP4.3□□□□□ -1.72
PCM1-223ENST00000524356 CEP55Q53EZ4 464 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms