RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 RHAGQ02094 409 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 ZNF45Q02386 682 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 GHRHRQ02643 423 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 RAD51Q06609 339 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 DBPQ10586 325 aaPredicted RBP10.08□□□□□ -0.8
SPIDR-224ENST00000524126 KRR1Q13601 381 aaKnown RBP10.08□□□□□ -0.8
SPIDR-224ENST00000524126 NFYCQ13952 458 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 GRB7Q14451 532 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 ZMYND11Q15326 602 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 C5orf22Q49AR2 442 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 PRSS36Q5K4E3 855 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 CERCAMQ5T4B2 595 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 ZNF470Q6ECI4 717 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 PM20D1Q6GTS8 502 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 PRMT9Q6P2P2 845 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 TMEM65Q6PI78 240 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 SPESP1Q6UW49 350 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 LARP4Q71RC2 724 aaKnown RBP eCLIP10.08□□□□□ -0.82e-6■■■■■ 38.7
SPIDR-224ENST00000524126 NLRP8Q86W28 1048 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 RNF135Q8IUD6 432 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 ZDHHC13Q8IUH4 622 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 ZNF557Q8N988 423 aaPredicted RBP10.08□□□□□ -0.8
SPIDR-224ENST00000524126 ZFAND1Q8TCF1 268 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 MARC2Q969Z3 335 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 ATG4CQ96DT6 458 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 TMEM80Q96HE8 168 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 OR2A14Q96R47 310 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 ACOX2Q99424 681 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 HDHD5Q9BXW7 423 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 NIF3L1Q9GZT8 377 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 AKTIPQ9H8T0 292 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 MAN2B2Q9Y2E5 1009 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 NDUFAF1Q9Y375 327 aa10.08□□□□□ -0.8
SPIDR-224ENST00000524126 OAS3Q9Y6K5 1087 aaKnown RBP10.08□□□□□ -0.8
SPIDR-224ENST00000524126 CIB4A0PJX0 185 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 DFFAO00273 331 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 UBFD1O14562 309 aaKnown RBP10.07□□□□□ -0.8
SPIDR-224ENST00000524126 CITO14578 2027 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 MITFO75030 526 aaPredicted RBP10.07□□□□□ -0.8
SPIDR-224ENST00000524126 MED26O95402 600 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 PDGFAP04085 211 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 TPH1P17752 444 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 GADD45AP24522 165 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 GRK5P34947 590 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 IL12RB1P42701 662 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 SLC15A1P46059 708 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 BAATQ14032 418 aaPredicted RBP10.07□□□□□ -0.8
SPIDR-224ENST00000524126 PAGE3Q5JUK9 113 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 ZNF691Q5VV52 312 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 MICAL3Q7RTP6 2002 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 GALNT5Q7Z7M9 940 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 MFSD6LQ8IWD5 586 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 TRIM48Q8IWZ4 208 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 CACTIN-AS1Q8N1I8 211 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 GALNT11Q8NCW6 608 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 UBASH3BQ8TF42 649 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 AFG1LQ8WV93 481 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 SEPT1Q8WYJ6 367 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 TRNT1Q96Q11 434 aaKnown RBP10.07□□□□□ -0.8
SPIDR-224ENST00000524126 TWNKQ96RR1 684 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 MSTO1Q9BUK6 570 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 EVA1BQ9NVM1 165 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 EIF3KQ9UBQ5 218 aaKnown RBP10.07□□□□□ -0.8
SPIDR-224ENST00000524126 KLHL20Q9Y2M5 609 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 LOC100506127A0A0U1RQW1 187 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 BBIP1A8MTZ0 92 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 E5RI56 91 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 I3L521 148 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 M0QYV0 167 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 AIREO43918 545 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 ACSL4O60488 711 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 TSC22D2O75157 780 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 MICAL2O94851 1124 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 PRSS23O95084 383 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 CYP2C8P10632 490 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 PRKCDQ05655 676 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 SMARCB1Q12824 385 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 FAPQ12884 760 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 TAB1Q15750 504 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 SULT1C3Q6IMI6 304 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 PAMR1Q6UXH9 720 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 FAM183BPQ6ZVS7 135 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 PLEKHM3Q6ZWE6 761 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 TMEM179BQ7Z7N9 219 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 CPA6Q8N4T0 437 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 LINC00469Q8N7U9 141 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 ZMIZ2Q8NF64 920 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 KLRG1Q96E93 195 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 TRMT61AQ96FX7 289 aaKnown RBP10.07□□□□□ -0.8
SPIDR-224ENST00000524126 Q96MT0 163 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 GPR22Q99680 433 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 TEX13BQ9BXU2 312 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 ANKHQ9HCJ1 492 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 PTPRHQ9HD43 1115 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 ACOT13Q9NPJ3 140 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 WASH6PQ9NQA3 447 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 ATPIF1Q9UII2 106 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 CPSF3Q9UKF6 684 aaKnown RBP10.07□□□□□ -0.8
SPIDR-224ENST00000524126 SNX7Q9UNH6 387 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 GRIP1Q9Y3R0 1128 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms