RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 DUSP3P51452 185 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-224ENST00000523873 ARL4CP56559 192 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 PDIA2Q13087 525 aaKnown RBP12.6□□□□□ -0.39
VEGFA-224ENST00000523873 CALCOCO2Q13137 446 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 TUBB2AQ13885 445 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 HLTFQ14527 1009 aaKnown RBP eCLIP12.6□□□□□ -0.39
VEGFA-224ENST00000523873 HIF1AQ16665 826 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 ZDHHC24Q6UX98 284 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 NAPRTQ6XQN6 538 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 AMZ2Q86W34 360 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 SPNS2Q8IVW8 549 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 PDIK1LQ8N165 341 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 KRT222Q8N1A0 295 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 Q8N9G6 341 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-224ENST00000523873 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.6□□□□□ -0.39
VEGFA-224ENST00000523873 BBOF1Q8ND07 529 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 MNS1Q8NEH6 495 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 HEXDCQ8WVB3 486 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 SGSM3Q96HU1 749 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 EBNA1BP2Q99848 306 aaKnown RBP12.6□□□□□ -0.39
VEGFA-224ENST00000523873 TUBB2BQ9BVA1 445 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 RAB17Q9H0T7 212 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 SYNDIG1Q9H7V2 258 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 C20orf96Q9NUD7 363 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-224ENST00000523873 SLC17A6Q9P2U8 582 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 PSMD13Q9UNM6 376 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 WDR37Q9Y2I8 494 aa12.6□□□□□ -0.39
VEGFA-224ENST00000523873 MGAT4DA6NG13 374 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 IQCF5A8MTL0 148 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 SMAPO00193 183 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 PPM1DO15297 605 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 DKK1O94907 266 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 POLBP06746 335 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 ERVK-10P10266 1014 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 F3P13726 295 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 BRAFP15056 766 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 VCLP18206 1134 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 IDSP22304 550 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 NSG1P42857 185 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 CLCNKAP51800 687 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 PLTPP55058 493 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 MPP1Q00013 466 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 GUCY2DQ02846 1103 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 CRYMQ14894 314 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 CLCA4Q14CN2 919 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 LONRF1Q17RB8 773 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 ZNF789Q5FWF6 425 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 LYPLAL1Q5VWZ2 237 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 DUS1LQ6P1R4 473 aaKnown RBP12.59□□□□□ -0.39
VEGFA-224ENST00000523873 IYDQ6PHW0 289 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 PACS1Q6VY07 963 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 CERS6Q6ZMG9 384 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 UNC5AQ6ZN44 842 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 C17orf82Q86X59 251 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-224ENST00000523873 DENND6AQ8IWF6 608 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 CFAP206Q8IYR0 622 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 CEP112Q8N8E3 955 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 FBXO36Q8NEA4 188 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 MAPK15Q8TD08 544 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 ADAMTS14Q8WXS8 1223 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 ART4Q93070 314 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 ZNF514Q96K75 400 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-224ENST00000523873 LINC00615Q96LM1 132 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-224ENST00000523873 CCDC3Q9BQI4 270 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 WWP1Q9H0M0 922 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 EVA1BQ9NVM1 165 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 ZNF624Q9P2J8 865 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-224ENST00000523873 LRIT1Q9P2V4 623 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 DMGDHQ9UI17 866 aaKnown RBP12.59□□□□□ -0.39
VEGFA-224ENST00000523873 PCDHGA1Q9Y5H4 931 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 TEX264Q9Y6I9 313 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 DNMT3AQ9Y6K1 912 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-224ENST00000523873 FAM169AQ9Y6X4 670 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 BPTFQ12830 3046 aa12.59□□□□□ -0.39
VEGFA-224ENST00000523873 UBA6A0AVT1 1052 aaPredicted RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 FAM149AA5PLN7 773 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 OR52A4PA6NMU1 304 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 E7ESA3 106 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 NDUFS3O75489 264 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 ADRB1P08588 477 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 PMLP29590 882 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 DEKP35659 375 aaKnown RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 SLC1A2P43004 574 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 PREPP48147 710 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 CSE1LP55060 971 aaKnown RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 EIF3BP55884 814 aaKnown RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 CCL7P80098 99 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 INSM1Q01101 510 aaPredicted RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 DMPKQ09013 629 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 CTBP1Q13363 440 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 BIRC2Q13490 618 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 THOC5Q13769 683 aaKnown RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 BRD3Q15059 726 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 ZNF658BQ4V348 819 aaPredicted RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 HSP90AA5PQ58FG0 334 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 AARS2Q5JTZ9 985 aaKnown RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 SPANXN3Q5MJ09 141 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 DNTTIP2Q5QJE6 756 aaKnown RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 ARMC3Q5W041 872 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 ZNF470Q6ECI4 717 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms