RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 TMEM220Q6QAJ8 160 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 XKR5Q6UX68 686 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 AMZ2Q86W34 360 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 PLXDC1Q8IUK5 500 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 SPC24Q8NBT2 197 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 CCDC112Q8NEF3 446 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 JPH3Q8WXH2 748 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-223ENST00000523125 SGF29Q96ES7 293 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 HES6Q96HZ4 224 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 TTC25Q96NG3 672 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 ASPSCR1Q9BZE9 553 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 ZMYND15Q9H091 742 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 FBXO8Q9NRD0 319 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 FKBPLQ9UIM3 349 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 R3HDM2Q9Y2K5 976 aaKnown RBP12.15□□□□□ -0.46
VEGFA-223ENST00000523125 PCDHB11Q9Y5F2 797 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 PCDHGA4Q9Y5G9 962 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 DNMT3AQ9Y6K1 912 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-223ENST00000523125 CAPN6Q9Y6Q1 641 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 TENM4Q6N022 2769 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 OR2AG2A6NM03 316 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 C2orf81A6NN90 581 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 LDB2O43679 373 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 SRP72O76094 671 aaKnown RBP12.14□□□□□ -0.47
VEGFA-223ENST00000523125 STK10O94804 968 aaKnown RBP12.14□□□□□ -0.47
VEGFA-223ENST00000523125 METTL18O95568 372 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 ANKRD34CP0C6C1 535 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 VCLP18206 1134 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 ZNF140P52738 457 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-223ENST00000523125 RAB15P59190 212 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 GPR18Q14330 331 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 NFE2L1Q14494 772 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 PRPSAP1Q14558 356 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 LINC00303Q3SY05 128 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 DCAF12Q5T6F0 453 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 METRNLQ641Q3 311 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 TRIM48Q8IWZ4 208 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 SYCE1Q8N0S2 351 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 UBL4BQ8N7F7 174 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 BEND7Q8N7W2 519 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-223ENST00000523125 FAM71DQ8N9W8 422 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 OR13C4Q8NGS5 318 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 GPR150Q8NGU9 434 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 SLC35B2Q8TB61 432 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 NAT14Q8WUY8 206 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 RTP4Q96DX8 246 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 C9orf72Q96LT7 481 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 CTRCQ99895 268 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 C19orf43Q9BQ61 176 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 TBL1YQ9BQ87 522 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 ZCCHC2Q9C0B9 1178 aaKnown RBP12.14□□□□□ -0.47
VEGFA-223ENST00000523125 APMAPQ9HDC9 416 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 POT1Q9NUX5 634 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 SIDT1Q9NXL6 827 aaKnown RBP12.14□□□□□ -0.47
VEGFA-223ENST00000523125 KLHL3Q9UH77 587 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 PILRAQ9UKJ1 303 aa12.14□□□□□ -0.47
VEGFA-223ENST00000523125 ZNF462Q96JM2 2506 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 LEPRP48357 1165 aaKnown RBP12.13□□□□□ -0.47
VEGFA-223ENST00000523125 GDF10P55107 478 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 RPE65Q16518 533 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 PARP6Q2NL67 630 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 FNBP1LQ5T0N5 605 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 MICALCLQ6ZW33 695 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 DET1Q7L5Y6 550 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 TIPARPQ7Z3E1 657 aaKnown RBP12.13□□□□□ -0.47
VEGFA-223ENST00000523125 RBM12BQ8IXT5 1001 aaKnown RBP12.13□□□□□ -0.47
VEGFA-223ENST00000523125 EXD3Q8N9H8 876 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 TTC13Q8NBP0 860 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 RSC1A1Q92681 617 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 CXorf40BQ96DE9 158 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 PPP1R2P1Q96PQ5 205 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 TEFMQ96QE5 360 aaKnown RBP12.13□□□□□ -0.47
VEGFA-223ENST00000523125 ASB8Q9H765 288 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 PSMD13Q9UNM6 376 aa12.13□□□□□ -0.47
VEGFA-223ENST00000523125 GOLGA6L9A6NEM1 432 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 MGAT4DA6NG13 374 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 CCL22O00626 93 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 TOX3O15405 576 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-223ENST00000523125 CAPN5O15484 640 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-223ENST00000523125 KIF1CO43896 1103 aaKnown RBP12.12□□□□□ -0.47
VEGFA-223ENST00000523125 ZNF189O75820 626 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-223ENST00000523125 CRTAMO95727 393 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 LIFP15018 202 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 AMD1P17707 334 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 MSH3P20585 1137 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 PBLDP30039 288 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-223ENST00000523125 AKT1P31749 480 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 HALP42357 657 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 CAPZBP47756 277 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 CYP4F2P78329 520 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 TMPRSS15P98073 1019 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 PDE1BQ01064 536 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 BCL7AQ4VC05 210 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 CEACAM20Q6UY09 585 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 ARHGEF18Q6ZSZ5 1173 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 CACNA2D3Q8IZS8 1091 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 RNF10Q8N5U6 811 aaKnown RBP12.12□□□□□ -0.47
VEGFA-223ENST00000523125 OR2L2Q8NH16 312 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 MED8Q96G25 268 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 ZNF514Q96K75 400 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms