RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 A0A1W2PPM1 405 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 B3GALT2O43825 422 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 MTHFRP42898 656 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 RPP38P78345 283 aaKnown RBP16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 GTF2H2Q13888 395 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 DPYSL2Q16555 572 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 ZNF776Q68DI1 518 aaPredicted RBP16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 TXNDC8Q6A555 127 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 GTF2H2CQ6P1K8 395 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 ENPP7Q6UWV6 458 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 OAFQ86UD1 273 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 KLK6Q92876 244 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 OSBPL2Q9H1P3 480 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 PNPOQ9NVS9 261 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 LOC100506127A0A0U1RQW1 187 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 IRGMA1A4Y4 181 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 C9J4A7 227 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 INPPL1O15357 1258 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 UROSP10746 265 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 HOXC12P31275 282 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 RGS8P57771 180 aaPredicted RBP16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 MAPK11Q15759 364 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 PIK3C3Q8NEB9 887 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 TTLQ8NG68 377 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 OR7A2PQ8NGA2 310 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 ZCCHC10Q8TBK6 192 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 TWIST2Q8WVJ9 160 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 RASSF5Q8WWW0 418 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 CCDC28BQ9BUN5 200 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 TDRD1Q9BXT4 1180 aaKnown RBP16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 BCL2L14Q9BZR8 327 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 CREBZFQ9NS37 354 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 GKN1Q9NS71 199 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 ERVK-11Q9UQG0 969 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 REXO2Q9Y3B8 237 aaKnown RBP16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 TSC22D2O75157 780 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 PRPS2P11908 318 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 FAM92BQ6ZTR7 304 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 MMAAQ8IVH4 418 aaKnown RBP16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 KBTBD8Q8NFY9 601 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 SPOCK2Q92563 424 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 GAL3ST4Q96RP7 486 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 CCNB1IP1Q9NPC3 277 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 CD48P09326 243 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 GCNT6Q5T4J0 391 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 CXXC5Q7LFL8 322 aaKnown RBP16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 PCDH19Q8TAB3 1148 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 FCRL5Q96RD9 977 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 MECRQ9BV79 373 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 SLCO1B3Q9NPD5 702 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 CMTM6Q9NX76 183 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 FBXW2Q9UKT8 454 aa16.07■□□□□ 0.16
PCDHA3-201ENST00000522353 SLC1A5Q15758 541 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 NAIF1Q69YI7 327 aaPredicted RBP16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 TSPAN14Q8NG11 270 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 LPIN3Q9BQK8 851 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 ITM2CQ9NQX7 267 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 MAGEB3O15480 346 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 TBX18O95935 607 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 ADSLP30566 484 aaPredicted RBP16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 SLC11A1P49279 550 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 POLR2JP52435 117 aaKnown RBP16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 ZIK1Q3SY52 487 aaPredicted RBP16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 MZT2BQ6NZ67 158 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 RTKNQ9BST9 563 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 OSBPL11Q9BXB4 747 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 MRPS30Q9NP92 439 aaKnown RBP16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 OSER1Q9NX31 292 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 GMEB2Q9UKD1 530 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 ENPP3O14638 875 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 TMCC2O75069 709 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 SOD2P04179 222 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 SAGP10523 405 aaPredicted RBP16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 ANPEPP15144 967 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 SUZ12Q15022 739 aaKnown RBP16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 ZBTB6Q15916 424 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 IL23RQ5VWK5 629 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 CPNE9Q8IYJ1 553 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 ZNF540Q8NDQ6 660 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 OR2AP1Q8NGE2 309 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 RAD9AQ99638 391 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 POLR3BQ9NW08 1133 aaPredicted RBP16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 DNAJC28Q9NX36 388 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 DTLQ9NZJ0 730 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 RBM7Q9Y580 266 aaKnown RBP16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 PHLPP1O60346 1717 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 CCL22O00626 93 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 SNPHO15079 494 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 RB1P06400 928 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 S100GP29377 79 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 LPIN1Q14693 890 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 ARSIQ5FYB1 569 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 ZYG11AQ6WRX3 759 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 ZNF730Q6ZMV8 503 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 ERVK-5Q9HDB9 667 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 ABCC6O95255 1503 aa16.06■□□□□ 0.16
PCDHA3-201ENST00000522353 SHPRHQ149N8 1683 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 SIN3BO75182 1162 aa16.05■□□□□ 0.16
PCDHA3-201ENST00000522353 LDOC1O95751 146 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms