RNA–Protein interactions for RNA: ENST00000522043.1

TOP1MT-215, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-215ENST00000522043 SH3BP2P78314 561 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 GTF2H3Q13889 308 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 NFE2L1Q14494 772 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 LDLRAP1Q5SW96 308 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 DENND5AQ6IQ26 1287 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 TMEM220Q6QAJ8 160 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 PLXDC1Q8IUK5 500 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 TRIM48Q8IWZ4 208 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 KLHDC8BQ8IXV7 354 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 IL22RA1Q8N6P7 574 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 BEND7Q8N7W2 519 aaPredicted RBP17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 OR4K2Q8NGD2 314 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 RNF31Q96EP0 1072 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 TGM7Q96PF1 710 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 TEFMQ96QE5 360 aaKnown RBP17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 LUC7LQ9NQ29 371 aaKnown RBP17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 FKBPLQ9UIM3 349 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 PKP3Q9Y446 797 aa17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 TMEM184BQ9Y519 407 aaPredicted RBP17.71■□□□□ 0.43
TOP1MT-215ENST00000522043 MACROD2A1Z1Q3 448 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 CCDC66A2RUB6 948 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 KCNN4O15554 427 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 PRAMEF1O95521 474 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 ZNF28P17035 718 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 AMD1P17707 334 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 RWDD2BP57060 319 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 XIAPP98170 497 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 ITGA9Q13797 1035 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 TAF1AQ15573 450 aaPredicted RBP17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 ITPRIPL1Q6GPH6 555 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 CEACAM20Q6UY09 585 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 AMZ2Q86W34 360 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 CDKL3Q8IVW4 592 aaPredicted RBP17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 ZSCAN1Q8NBB4 408 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 OR13C4Q8NGS5 318 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 ZNF398Q8TD17 642 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 CXorf40BQ96DE9 158 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 CALR3Q96L12 384 aaKnown RBP17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 SPATA13Q96N96 652 aa17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 ZNF768Q9H5H4 540 aaKnown RBP17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 PACSIN2Q9UNF0 486 aaPredicted RBP17.7■□□□□ 0.42
TOP1MT-215ENST00000522043 TENM4Q6N022 2769 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 PYCARD-AS1I3L0S3 204 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 STX7O15400 261 aaKnown RBP17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 PPFIA2O75334 1257 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 ANXA9O76027 345 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 SRP72O76094 671 aaKnown RBP17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 STK17BO94768 372 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 LPOP22079 712 aaPredicted RBP17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 PBLDP30039 288 aaPredicted RBP17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 TNNT3P45378 269 aaPredicted RBP17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 SEPHS1P49903 392 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 NAP1L1P55209 391 aaKnown RBP17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 SPARCL1Q14515 664 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 RPE65Q16518 533 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 CCDC181Q5TID7 509 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 DARS2Q6PI48 645 aaKnown RBP17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 DET1Q7L5Y6 550 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 UNC5BQ8IZJ1 945 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 NLGN4XQ8N0W4 816 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 NLGN4YQ8NFZ3 816 aaPredicted RBP17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 TTC25Q96NG3 672 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 PSMD13Q9UNM6 376 aa17.69■□□□□ 0.42
TOP1MT-215ENST00000522043 AGAP14A8MT82 685 aa17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 CCL22O00626 93 aa17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 POLR1CO15160 346 aaPredicted RBP17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 DDX3YO15523 660 aaKnown RBP17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 KCNJ13O60928 360 aa17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 VCLP18206 1134 aa17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 ZNF140P52738 457 aaPredicted RBP17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 FNBP1LQ5T0N5 605 aa17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 KCTD11Q693B1 232 aa17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 DUS1LQ6P1R4 473 aaKnown RBP17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 FAM92BQ6ZTR7 304 aa17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 PRSS42Q7Z5A4 293 aa17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 RBM12BQ8IXT5 1001 aaKnown RBP17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 ZPBPQ9BS86 351 aa17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 ZCCHC2Q9C0B9 1178 aaKnown RBP17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 STARD5Q9NSY2 213 aa17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 EPHA6Q9UF33 1036 aa17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 IL17BQ9UHF5 180 aa17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 R3HDM2Q9Y2K5 976 aaKnown RBP17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 AAR2Q9Y312 384 aaKnown RBP17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 CFAP20Q9Y6A4 193 aaKnown RBP17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 DNMT3AQ9Y6K1 912 aaPredicted RBP17.68■□□□□ 0.42
TOP1MT-215ENST00000522043 TCRBV7S2A1N4TA0A589 114 aa17.67■□□□□ 0.42
TOP1MT-215ENST00000522043 C5orf60A6NFR6 353 aa17.67■□□□□ 0.42
TOP1MT-215ENST00000522043 TOX3O15405 576 aaPredicted RBP17.67■□□□□ 0.42
TOP1MT-215ENST00000522043 NKX2-8O15522 239 aa17.67■□□□□ 0.42
TOP1MT-215ENST00000522043 F8A1P23610 371 aa17.67■□□□□ 0.42
TOP1MT-215ENST00000522043 TMPRSS15P98073 1019 aa17.67■□□□□ 0.42
TOP1MT-215ENST00000522043 NFKB2Q00653 900 aa17.67■□□□□ 0.42
TOP1MT-215ENST00000522043 NFATC3Q12968 1075 aa17.67■□□□□ 0.42
TOP1MT-215ENST00000522043 KLF1Q13351 362 aaPredicted RBP17.67■□□□□ 0.42
TOP1MT-215ENST00000522043 METRNLQ641Q3 311 aa17.67■□□□□ 0.42
TOP1MT-215ENST00000522043 LILRA3Q8N6C8 439 aaPredicted RBP17.67■□□□□ 0.42
TOP1MT-215ENST00000522043 SPDYE1Q8NFV5 336 aaPredicted RBP17.67■□□□□ 0.42
TOP1MT-215ENST00000522043 KLHL6Q8WZ60 621 aa17.67■□□□□ 0.42
TOP1MT-215ENST00000522043 INSM2Q96T92 566 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms