RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 ACVR1CQ8NER5 493 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 LINC00615Q96LM1 132 aaPredicted RBP23.78■■□□□ 1.4
PVT1-212ENST00000521951 CCM2Q9BSQ5 444 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 NUSAP1Q9BXS6 441 aaKnown RBP23.78■■□□□ 1.4
PVT1-212ENST00000521951 TMEM168Q9H0V1 697 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 SLC23A2Q9UGH3 650 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 NFS1Q9Y697 457 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 FAM95CA0A1B0GW59 222 aa23.77■■□□□ 1.4
PVT1-212ENST00000521951 ARHGAP33O14559 1287 aa23.77■■□□□ 1.4
PVT1-212ENST00000521951 KHNYNO15037 678 aaKnown RBP23.77■■□□□ 1.4
PVT1-212ENST00000521951 TCEA3O75764 348 aa23.77■■□□□ 1.4
PVT1-212ENST00000521951 TRIM16O95361 564 aa23.77■■□□□ 1.4
PVT1-212ENST00000521951 FTH1P02794 183 aa23.77■■□□□ 1.4
PVT1-212ENST00000521951 ILF2Q12905 390 aaKnown RBP23.77■■□□□ 1.4
PVT1-212ENST00000521951 HECTD2Q5U5R9 776 aa23.77■■□□□ 1.4
PVT1-212ENST00000521951 SLC13A1Q9BZW2 595 aa23.77■■□□□ 1.4
PVT1-212ENST00000521951 TRNAU1APQ9NX07 287 aaKnown RBP23.77■■□□□ 1.4
PVT1-212ENST00000521951 ZNF180Q9UJW8 692 aa23.77■■□□□ 1.4
PVT1-212ENST00000521951 MED16Q9Y2X0 877 aa23.77■■□□□ 1.4
PVT1-212ENST00000521951 VWA7Q9Y334 891 aa23.77■■□□□ 1.4
PVT1-212ENST00000521951 ITGA2BP08514 1039 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 ACP5P13686 325 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 CHRM3P20309 590 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 PBLDP30039 288 aaPredicted RBP23.76■■□□□ 1.39
PVT1-212ENST00000521951 SERPINB9P50453 376 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 TIAL1Q01085 375 aaKnown RBP eCLIP23.76■■□□□ 1.396e-7■■■■□ 19.6
PVT1-212ENST00000521951 IFFO1Q0D2I5 559 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 ZNF423Q2M1K9 1284 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 TCEAL6Q6IPX3 200 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 FAM45BPQ6NSW5 357 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 OXR1Q8N573 874 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 FAM45AQ8TCE6 357 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 TCEAL3Q969E4 200 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 ELMO2Q96JJ3 720 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 PANX3Q96QZ0 392 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 ELF4Q99607 663 aaPredicted RBP23.76■■□□□ 1.39
PVT1-212ENST00000521951 GPR22Q99680 433 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 ZDHHC5Q9C0B5 715 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 GALPQ9UBC7 116 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 GULP1Q9UBP9 304 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 APOBEC3BQ9UH17 382 aaKnown RBP23.76■■□□□ 1.39
PVT1-212ENST00000521951 ST14Q9Y5Y6 855 aa23.76■■□□□ 1.39
PVT1-212ENST00000521951 ZFC3H1O60293 1989 aaKnown RBP23.76■■□□□ 1.39
PVT1-212ENST00000521951 MYO15AQ9UKN7 3530 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 HMX2A2RU54 273 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 SYPP08247 313 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 CDKN2DP55273 166 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 ARHGAP8P85298 464 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 CASP8Q14790 479 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 INSCQ1MX18 579 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 HLA-BQ31612 363 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 IL27RAQ6UWB1 636 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 AMZ2Q86W34 360 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 OR2L2Q8NH16 312 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 EPS8L3Q8TE67 593 aaKnown RBP23.75■■□□□ 1.39
PVT1-212ENST00000521951 FAM136AQ96C01 138 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 ZIM3Q96PE6 472 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 TIMM29Q9BSF4 260 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 TSSK1BQ9BXA7 367 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 PPCSQ9HAB8 311 aa23.75■■□□□ 1.39
PVT1-212ENST00000521951 MGAT4DA6NG13 374 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 E5RI56 91 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 ZNF806P0C7X5 589 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 CTSEP14091 401 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 CCR7P32248 378 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 SLCO1A2P46721 670 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 RXRGP48443 463 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 HNRNPKP61978 463 aaKnown RBP eCLIP23.74■■□□□ 1.392e-6■■■□□ 16.5
PVT1-212ENST00000521951 CTBSQ01459 385 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 BMPR2Q13873 1038 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 TCEA2Q15560 299 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 PRRT3Q5FWE3 981 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 MROH9Q5TGP6 573 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 TDRPQ86YL5 185 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 DCLK2Q8N568 766 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 CCL4L1Q8NHW4 92 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 ELMO1Q92556 727 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 KCNJ9Q92806 393 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 OLFM1Q99784 485 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 ROPN1BQ9BZX4 212 aaPredicted RBP23.74■■□□□ 1.39
PVT1-212ENST00000521951 ROPN1Q9HAT0 212 aaPredicted RBP23.74■■□□□ 1.39
PVT1-212ENST00000521951 SARS2Q9NP81 518 aaKnown RBP23.74■■□□□ 1.39
PVT1-212ENST00000521951 LATS2Q9NRM7 1088 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 KLC4Q9NSK0 619 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 PSMC3IPQ9P2W1 217 aaPredicted RBP23.74■■□□□ 1.39
PVT1-212ENST00000521951 NCDNQ9UBB6 729 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 FAM8A1Q9UBU6 413 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 SLC39A10Q9ULF5 831 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 DNAJC16Q9Y2G8 782 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 CABIN1Q9Y6J0 2220 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 C17orf113A0A1B0GUU1 675 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 SMIM23A6NLE4 172 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 PROB1E7EW31 1015 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 H3BM21 787 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 GSTM1P09488 218 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 SAT1P21673 171 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 FDXRP22570 491 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 TAS2R39P59534 338 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 GSTM4Q03013 218 aa23.74■■□□□ 1.39
PVT1-212ENST00000521951 C1orf61Q13536 156 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms