RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 NXNL1Q96CM4 212 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 LINGO1Q96FE5 620 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 DMRTB1Q96MA1 342 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 IKZF4Q9H2S9 585 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 BRD9Q9H8M2 597 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 RDH8Q9NYR8 311 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 NDUFAF4Q9P032 175 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 GPSM3Q9Y4H4 160 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 A0A1W2PPM1 405 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 DCLK1O15075 740 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 EPORP19235 508 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 GRIA3P42263 894 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 IDH2P48735 452 aaKnown RBP12□□□□□ -0.49
ERGIC1-208ENST00000520399 SSX2Q16385 188 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 XKR6Q5GH73 641 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 PIK3R6Q5UE93 754 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 CHADLQ6NUI6 762 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 TRABD2AQ86V40 505 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 IRF2BP1Q8IU81 584 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 OR2L3Q8NG85 312 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 IRGQQ8WZA9 623 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 MYO19Q96H55 970 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 PCDHGB5Q9Y5G0 923 aa12□□□□□ -0.49
ERGIC1-208ENST00000520399 TLR5O60602 858 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 DBIP07108 87 aaKnown RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 MTHFD1P11586 935 aaKnown RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 MMP8P22894 467 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 RELAQ04206 551 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 TUSC3Q13454 348 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 NADK2Q4G0N4 442 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 HGSNATQ68CP4 663 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 ZBTB46Q86UZ6 589 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 HM13Q8TCT9 377 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 ERMAPQ96PL5 475 aaPredicted RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 HIST1H2AAQ96QV6 131 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 HEPHQ9BQS7 1158 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 KIAA1522Q9P206 1035 aaPredicted RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 SLIT2O94813 1529 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 GRXCR2A6NFK2 248 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 LYPLA1O75608 230 aaPredicted RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 LINC00032P0C843 101 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 HOXC8P31273 242 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 SCN1BQ07699 218 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 PTCD3Q96EY7 689 aaKnown RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 ST6GALNAC4Q9H4F1 302 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 SMURF2Q9HAU4 748 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 GLOD4Q9HC38 313 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 IFT46Q9NQC8 304 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 ZNHIT2Q9UHR6 403 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 A6NHS1 94 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 C12orf71A8MTZ7 269 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 SCAMP3O14828 347 aaKnown RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 METTL18O95568 372 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 NR2F1P10589 423 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 RGS8P57771 180 aaPredicted RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 COL9A3Q14050 684 aaPredicted RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 POM121L1PQ3SYA9 428 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 SNX20Q7Z614 316 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 DENND6BQ8NEG7 585 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 CSPG4P5Q96PW8 444 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 CPXM1Q96SM3 734 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 MRPS23Q9Y3D9 190 aaKnown RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 RIPK3Q9Y572 518 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 SMIM28A0A1B0GU29 152 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 RNF225M0QZC1 329 aaPredicted RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 HDAC3O15379 428 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 PPM1AP35813 382 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 DEFA5Q01523 94 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 MBTD1Q05BQ5 628 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 PARP15Q460N3 678 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 BEND5Q7L4P6 421 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 RBFAQ8N0V3 343 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 CD101Q93033 1021 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 HDAC10Q969S8 669 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 RAD51AP1Q96B01 352 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 TTPALQ9BTX7 342 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 FAM124BQ9H5Z6 455 aaPredicted RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 MSRAQ9UJ68 235 aa11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 PRPF19Q9UMS4 504 aaKnown RBP11.99□□□□□ -0.49
ERGIC1-208ENST00000520399 AZIN1O14977 448 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 TFPIP10646 304 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 CDH4P55283 916 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 GRM3Q14832 879 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 MAPKAPK3Q16644 382 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 ZDHHC20Q5W0Z9 365 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 LRP10Q7Z4F1 713 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 ZNF540Q8NDQ6 660 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 PFDN5Q99471 154 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 CGREF1Q99674 301 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 TOR3AQ9H497 397 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 HMGXB4Q9UGU5 601 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 OGDHLQ9ULD0 1010 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 GNEQ9Y223 722 aaKnown RBP11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 CPNE3O75131 537 aaKnown RBP11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 USP2O75604 605 aaPredicted RBP11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 CCNDBP1O95273 360 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 GRK5P34947 590 aa11.98□□□□□ -0.49
ERGIC1-208ENST00000520399 CRHR1P34998 444 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms