RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 SMARCAL1Q9NZC9 954 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 PCDHGA8Q9Y5G5 932 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 CFAP20Q9Y6A4 193 aaKnown RBP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 COL27A1Q8IZC6 1860 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 ZNF106Q9H2Y7 1883 aaKnown RBP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 IGHV5-10-1A0A0J9YXX1 117 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 A6NCN8 305 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 OR51F1A6NGY5 319 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 PGRMC1O00264 195 aaKnown RBP13.91□□□□□ -0.18
VEGFA-221ENST00000520265 ITGA2BP08514 1039 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 ACRV1P26436 265 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 GRIA1P42261 906 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 PRAMEP78395 509 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 CACNG1Q06432 222 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 ZFP36L1Q07352 338 aaKnown RBP13.91□□□□□ -0.18
VEGFA-221ENST00000520265 SEMA5AQ13591 1074 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 LAMB3Q13751 1172 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 NR1D2Q14995 579 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 C16orf72Q14CZ0 275 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 FAM83HQ6ZRV2 1179 aaPredicted RBP13.91□□□□□ -0.18
VEGFA-221ENST00000520265 SLITRK4Q8IW52 837 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 REXO1L1PQ8IX06 675 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 CFAP206Q8IYR0 622 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 OR4D9Q8NGE8 314 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 OR6P1Q8NGX9 317 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 HEXDCQ8WVB3 486 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 C12orf66Q96MD2 445 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 NAP1L3Q99457 506 aaPredicted RBP13.91□□□□□ -0.18
VEGFA-221ENST00000520265 DPYSL5Q9BPU6 564 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 WWP1Q9H0M0 922 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 VPS37BQ9H9H4 285 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 ASCL3Q9NQ33 180 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 POT1Q9NUX5 634 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 ZDHHC3Q9NYG2 299 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 WDR37Q9Y2I8 494 aa13.91□□□□□ -0.18
VEGFA-221ENST00000520265 PRAMEF33A0A0G2JMD5 474 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 GOLGA6L10A0A0M3HER8 536 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 CCDC162PA2VCL2 907 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 MGAT4DA6NG13 374 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 EFCAB7A8K855 629 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 KCNJ13O60928 360 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 RASSF9O75901 435 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 DXOO77932 396 aaKnown RBP13.9□□□□□ -0.18
VEGFA-221ENST00000520265 UBXN7O94888 489 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 ATP1B2P14415 290 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-221ENST00000520265 BRAFP15056 766 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 SLC5A2P31639 672 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 SLC19A1P41440 591 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 LIMK2P53671 638 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 EPHA4P54764 986 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 UBE2IP63279 158 aaKnown RBP13.9□□□□□ -0.18
VEGFA-221ENST00000520265 GPS1Q13098 491 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 MSLNQ13421 630 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-221ENST00000520265 CLCA4Q14CN2 919 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 GPR33Q49SQ1 333 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 TMEM164Q5U3C3 297 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 DUS1LQ6P1R4 473 aaKnown RBP13.9□□□□□ -0.18
VEGFA-221ENST00000520265 TMEM71Q6P5X7 295 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 ZNF449Q6P9G9 518 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 DRICH1Q6PGQ1 229 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-221ENST00000520265 C4orf22Q6V702 233 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 TMEM26Q6ZUK4 368 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 C11orf96Q7Z7L8 435 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 SPACA3Q8IXA5 215 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 KLHDC8BQ8IXV7 354 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 PRELID2Q8N945 189 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 AGBL5Q8NDL9 886 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 USP7Q93009 1102 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 HDAC10Q969S8 669 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 TMEM159Q96B96 161 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 CCDC97Q96F63 343 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-221ENST00000520265 CDKN2AIPNLQ96HQ2 116 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 TGM7Q96PF1 710 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 TTC1Q99614 292 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 ZNF624Q9P2J8 865 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-221ENST00000520265 DRG1Q9Y295 367 aaKnown RBP13.9□□□□□ -0.18
VEGFA-221ENST00000520265 URB1O60287 2271 aaKnown RBP13.9□□□□□ -0.18
VEGFA-221ENST00000520265 DMXL2Q8TDJ6 3036 aa13.9□□□□□ -0.18
VEGFA-221ENST00000520265 A0A087WV48 116 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 LILRA5A6NI73 299 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 PRAMEF10O60809 474 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 SUN1O94901 812 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 KRT14P02533 472 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 THRAP10827 490 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 CCL4P13236 92 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 XRCC1P18887 633 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-221ENST00000520265 ADRA1DP25100 572 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 ETV5P41161 510 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 ARSDP51689 593 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 CXADRP78310 365 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 CRADDP78560 199 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 GPR18Q14330 331 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 DBN1Q16643 649 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 CLPPQ16740 277 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-221ENST00000520265 BCL7AQ4VC05 210 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 TSTD2Q5T7W7 516 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 AGAP9Q5VTM2 703 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 IRGCQ6NXR0 463 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 CASC4Q6P4E1 433 aa13.89□□□□□ -0.19
VEGFA-221ENST00000520265 AFTPHQ6ULP2 937 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms