RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 GPSM3Q9Y4H4 160 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 SPAG17Q6Q759 2223 aa17.52■□□□□ 0.39
SDC2-205ENST00000520233 C17orf113A0A1B0GUU1 675 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 MGAT4DA6NG13 374 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 IQCF5A8MTL0 148 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 E5RI56 91 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 H3BM21 787 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 NIPSNAP2O75323 286 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 VPS26AO75436 327 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 KRT38O76015 456 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 TRIM16O95361 564 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 LMNAP02545 664 aaKnown RBP17.51■□□□□ 0.39
SDC2-205ENST00000520233 JUNDP17535 347 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 CHRM3P20309 590 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 GRIK2Q13002 908 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 LRP8Q14114 963 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 ZNF423Q2M1K9 1284 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 ZNF542PQ5EBM4 170 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 IL27RAQ6UWB1 636 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 CHST15Q7LFX5 561 aaPredicted RBP17.51■□□□□ 0.39
SDC2-205ENST00000520233 KRT222Q8N1A0 295 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 LKAAEAR1Q8TD35 194 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 EPS8L3Q8TE67 593 aaKnown RBP17.51■□□□□ 0.39
SDC2-205ENST00000520233 ANKRD7Q92527 254 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 ZIM3Q96PE6 472 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 TIMM29Q9BSF4 260 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 SLC13A1Q9BZW2 595 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 APOBEC3BQ9UH17 382 aaKnown RBP17.51■□□□□ 0.39
SDC2-205ENST00000520233 VWA7Q9Y334 891 aa17.51■□□□□ 0.39
SDC2-205ENST00000520233 HMX2A2RU54 273 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 ARHGAP33O14559 1287 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 RASGRF2O14827 1237 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 KHNYNO15037 678 aaKnown RBP17.5■□□□□ 0.39
SDC2-205ENST00000520233 KPNA5O15131 536 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 DFNA5O60443 496 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 CDH16O75309 829 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 KRT37O76014 449 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 SYPP08247 313 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 VCLP18206 1134 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 ITGB6P18564 788 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 FDXRP22570 491 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 HNRNPKP61978 463 aaKnown RBP eCLIP17.5■□□□□ 0.395e-10■■□□□ 13.3
SDC2-205ENST00000520233 ARHGAP8P85298 464 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 POU4F1Q01851 419 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 INSCQ1MX18 579 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 PLA2G4EQ3MJ16 856 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 ZNF658BQ4V348 819 aaPredicted RBP17.5■□□□□ 0.39
SDC2-205ENST00000520233 UGT3A1Q6NUS8 523 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 HDXQ7Z353 690 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 AMZ2Q86W34 360 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 RIBC1Q8N443 379 aaPredicted RBP17.5■□□□□ 0.39
SDC2-205ENST00000520233 DCLK2Q8N568 766 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 ACVR1CQ8NER5 493 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 OR2L2Q8NH16 312 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 ELF4Q99607 663 aaPredicted RBP17.5■□□□□ 0.39
SDC2-205ENST00000520233 TMEM168Q9H0V1 697 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 TCEAL2Q9H3H9 227 aaPredicted RBP17.5■□□□□ 0.39
SDC2-205ENST00000520233 TM7SF3Q9NS93 570 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 SPATS2LQ9NUQ6 558 aaKnown RBP17.5■□□□□ 0.39
SDC2-205ENST00000520233 EURLQ9NYK6 297 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 TAS2R13Q9NYV9 303 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 KLHL42Q9P2K6 505 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 SLC23A2Q9UGH3 650 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 SLC39A10Q9ULF5 831 aa17.5■□□□□ 0.39
SDC2-205ENST00000520233 IQANK1A0A1B0GTG1 560 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 SCAMP1O15126 338 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 SNRPAP09012 282 aaKnown RBP17.49■□□□□ 0.39
SDC2-205ENST00000520233 ZNF806P0C7X5 589 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 ACP5P13686 325 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 CTSEP14091 401 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 AOAHP28039 575 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 PBLDP30039 288 aaPredicted RBP17.49■□□□□ 0.39
SDC2-205ENST00000520233 CCR7P32248 378 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 SKIV2L2P42285 1042 aaKnown RBP17.49■□□□□ 0.39
SDC2-205ENST00000520233 SLCO1A2P46721 670 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 RXRGP48443 463 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 ARRB1P49407 418 aaPredicted RBP17.49■□□□□ 0.39
SDC2-205ENST00000520233 CLCN7P51798 805 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 CLCNKAP51800 687 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 SLC12A2P55011 1212 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 CDKN2DP55273 166 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 TAS2R39P59534 338 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 IRX4P78413 519 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 TIAL1Q01085 375 aaKnown RBP eCLIP17.49■□□□□ 0.39
SDC2-205ENST00000520233 ZNF844Q08AG5 666 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 DMPKQ09013 629 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 BMPR2Q13873 1038 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 USP10Q14694 798 aaKnown RBP17.49■□□□□ 0.39
SDC2-205ENST00000520233 CCDC6Q16204 474 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 PRAMEF14Q5SWL7 426 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 MROH9Q5TGP6 573 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 CROCCP2Q86T23 111 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 HM13Q8TCT9 377 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 ELMO1Q92556 727 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 MTBPQ96DY7 904 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 TSPAN17Q96FV3 270 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 OLFM1Q99784 485 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 POPDC3Q9HBV1 291 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 FSCN3Q9NQT6 498 aa17.49■□□□□ 0.39
SDC2-205ENST00000520233 KLC4Q9NSK0 619 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms