RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 CAPZA1P52907 286 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 RBPJQ06330 500 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 RAB6CQ53S08 254 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 COLCA1Q6ZS62 124 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 MSANTD1Q6ZTZ1 278 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 IQCA1Q86XH1 822 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 CCAR2Q8N163 923 aaKnown RBP5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 NEXN-AS1Q8NBZ9 246 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 ROBO4Q8WZ75 1007 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 RMDN2Q96LZ7 410 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 OR6C1Q96RD1 312 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 FNBP1Q96RU3 617 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 SEPHS2Q99611 448 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 GPATCH1Q9BRR8 931 aaKnown RBP5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 DESI2Q9BSY9 194 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 DCLK3Q9C098 648 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 RAB6CQ9H0N0 254 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 RBM38Q9H0Z9 239 aaKnown RBP5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 B3GALT5Q9Y2C3 310 aa5.19□□□□□ -1.58
HMGB1P46-201ENST00000520062 A0A1W2PPM1 405 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 hDV102S1A0JD36 115 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 INAFM1C9JVW0 142 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 DVL1O14640 695 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 TNFRSF13BO14836 293 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 TO15178 435 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 SERPINI2O75830 405 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 BAG2O95816 211 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 IGHV4-30-4P0DP06 118 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 CASTP20810 708 aaKnown RBP5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 PLCD1P51178 756 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 INHBEP58166 350 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 ABATP80404 500 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 DSC1Q08554 894 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 Q0VFX4 171 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 TRAF2Q12933 501 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 TUBB2AQ13885 445 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 RABEP1Q15276 862 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 OASLQ15646 514 aaKnown RBP5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 TDRD12Q587J7 1177 aaKnown RBP5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 PAPPA-AS1Q5QFB9 102 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 C6orf136Q5SQH8 315 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 MPP7Q5T2T1 576 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 RGMBQ6NW40 437 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 WDR73Q6P4I2 378 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 FIGLAQ6QHK4 219 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 PPP1R21Q6ZMI0 780 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 DET1Q7L5Y6 550 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 GLCCI1Q86VQ1 547 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 SNX32Q86XE0 403 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 ACVR1CQ8NER5 493 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 OR14A16Q8NHC5 309 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 MOSPD2Q8NHP6 518 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 PPP4R1Q8TF05 950 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 SLAMF9Q96A28 289 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 OLFM1Q99784 485 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 CMKLR1Q99788 373 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 TUBB2BQ9BVA1 445 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 FOXP1Q9H334 677 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 COPS7BQ9H9Q2 264 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 HIF1ANQ9NWT6 349 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 C1RLQ9NZP8 487 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 GRIP1Q9Y3R0 1128 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 PTPRCP08575 1304 aa5.18□□□□□ -1.58
HMGB1P46-201ENST00000520062 A0A1B0GVT2 93 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 HTR3EA5X5Y0 456 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 ANKUB1A6NFN9 424 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 OR6C76A6NM76 312 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 HEPACAM2A8MVW5 462 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 PTGESO14684 152 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 PSG1P11464 419 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 LMO1P25800 156 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 CRYZQ08257 329 aaKnown RBP5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 ACSM1Q08AH1 577 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 ASIC2Q16515 512 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 KLHL26Q53HC5 615 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 ODF2Q5BJF6 829 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 RNASEH2BQ5TBB1 312 aaKnown RBP5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 ALS2CLQ60I27 953 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 SHQ1Q6PI26 577 aaKnown RBP5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 CCNI2Q6ZMN8 369 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 Q75L30 129 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 OR5R1Q8NH85 324 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 NTN5Q8WTR8 489 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 FAM216AQ8WUB2 273 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 EXT2Q93063 718 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 MR1Q95460 341 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 PRMT6Q96LA8 375 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 ZNF558Q96NG5 402 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 MTERF1Q99551 399 aaKnown RBP5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 C16orf70Q9BSU1 422 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 MLPHQ9BV36 600 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 KRTAP9-3Q9BYQ3 159 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 HHATLQ9HCP6 504 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 NOX4Q9NPH5 578 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 CHCHD3Q9NX63 227 aaKnown RBP5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 DPP3Q9NY33 737 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 PTGDR2Q9Y5Y4 395 aa5.17□□□□□ -1.58
HMGB1P46-201ENST00000520062 OR2M5A3KFT3 312 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms