RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 ADAMTS14Q8WXS8 1223 aa22.22■■□□□ 1.15
SKP1-206ENST00000519321 FCRL3Q96P31 734 aaPredicted RBP22.22■■□□□ 1.15
SKP1-206ENST00000519321 LRRC1Q9BTT6 524 aa22.22■■□□□ 1.15
SKP1-206ENST00000519321 STN1Q9H668 368 aaKnown RBP22.22■■□□□ 1.15
SKP1-206ENST00000519321 WASH6PQ9NQA3 447 aa22.22■■□□□ 1.15
SKP1-206ENST00000519321 TBC1D29Q9UFV1 150 aa22.22■■□□□ 1.15
SKP1-206ENST00000519321 VPS9D1Q9Y2B5 631 aa22.22■■□□□ 1.15
SKP1-206ENST00000519321 ZCWPW2A0A1B0GU75 182 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 PRR19A6NJB7 356 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 ZW10O43264 779 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 SGTAO43765 313 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 NUDT21O43809 227 aaKnown RBP22.21■■□□□ 1.15
SKP1-206ENST00000519321 ZNF500O60304 480 aaPredicted RBP22.21■■□□□ 1.15
SKP1-206ENST00000519321 NDUFS3O75489 264 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 MYF5P13349 255 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 PNLIPP16233 465 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 OGNP20774 298 aaKnown RBP22.21■■□□□ 1.15
SKP1-206ENST00000519321 MSS51Q4VC12 460 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 CCDC157Q569K6 752 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 AGAP9Q5VTM2 703 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 NEPROQ6NW34 567 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 GUSBP11Q6P575 273 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 CENPUQ71F23 418 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 LRRC6Q86X45 466 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 BEND7Q8N7W2 519 aaPredicted RBP22.21■■□□□ 1.15
SKP1-206ENST00000519321 HM13Q8TCT9 377 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 CCM2Q9BSQ5 444 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 TSSK1BQ9BXA7 367 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 ACSL5Q9ULC5 683 aa22.21■■□□□ 1.15
SKP1-206ENST00000519321 A6NCN8 305 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 PDZK1P1A8MUH7 402 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 E7ESA3 106 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 PRMT5O14744 637 aaPredicted RBP22.2■■□□□ 1.14
SKP1-206ENST00000519321 EIF3HO15372 352 aaKnown RBP eCLIP22.2■■□□□ 1.14
SKP1-206ENST00000519321 FTH1P02794 183 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 ELK3P41970 407 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 HALP42357 657 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 PDIA2Q13087 525 aaKnown RBP22.2■■□□□ 1.14
SKP1-206ENST00000519321 SEMA3AQ14563 771 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 CRYMQ14894 314 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 ZNF449Q6P9G9 518 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 IYDQ6PHW0 289 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 ABRAXAS1Q6UWZ7 409 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 MICALCLQ6ZW33 695 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 SFRP1Q8N474 314 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 ARL14Q8N4G2 192 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 CLDN19Q8N6F1 224 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 WDR48Q8TAF3 677 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 ART4Q93070 314 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 PHACTR1Q9C0D0 580 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 PRDM8Q9NQV8 689 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 C20orf96Q9NUD7 363 aaPredicted RBP22.2■■□□□ 1.14
SKP1-206ENST00000519321 GRHL1Q9NZI5 618 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 MARCH4Q9P2E8 410 aaPredicted RBP22.2■■□□□ 1.14
SKP1-206ENST00000519321 TEX264Q9Y6I9 313 aa22.2■■□□□ 1.14
SKP1-206ENST00000519321 ARHGEF17Q96PE2 2063 aaPredicted RBP22.19■■□□□ 1.14
SKP1-206ENST00000519321 PBLDP30039 288 aaPredicted RBP22.19■■□□□ 1.14
SKP1-206ENST00000519321 FASLGP48023 281 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 PLTPP55058 493 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 SLC7A5Q01650 507 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 TYSND1Q2T9J0 566 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 DNTTIP2Q5QJE6 756 aaKnown RBP22.19■■□□□ 1.14
SKP1-206ENST00000519321 METRNLQ641Q3 311 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 SLC9B2Q86UD5 537 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 PNPLA1Q8N8W4 532 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 SEC14L1Q92503 715 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 SH3KBP1Q96B97 665 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 CCDC97Q96F63 343 aaPredicted RBP22.19■■□□□ 1.14
SKP1-206ENST00000519321 TRIM56Q9BRZ2 755 aaKnown RBP22.19■■□□□ 1.14
SKP1-206ENST00000519321 FAM167BQ9BTA0 163 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 FAM129AQ9BZQ8 928 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 FOXP3Q9BZS1 431 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 ABCG4Q9H172 646 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 LRIT1Q9P2V4 623 aa22.19■■□□□ 1.14
SKP1-206ENST00000519321 ZC3H7BQ9UGR2 993 aaKnown RBP22.19■■□□□ 1.14
SKP1-206ENST00000519321 GOLGA4Q13439 2230 aaKnown RBP22.18■■□□□ 1.14
SKP1-206ENST00000519321 RHPN2P1A8MT19 583 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 GOLGA8KD6RF30 607 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 GOLGA8TH3BQL2 631 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 OR1I1O60431 355 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 BANF1O75531 89 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 ADRB1P08588 477 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 RPS3P23396 243 aaKnown RBP eCLIP22.18■■□□□ 1.142e-11■■□□□ 12.7
SKP1-206ENST00000519321 MAZP56270 477 aaKnown RBP22.18■■□□□ 1.14
SKP1-206ENST00000519321 NFE2L1Q14494 772 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 LDB1Q86U70 411 aaPredicted RBP22.18■■□□□ 1.14
SKP1-206ENST00000519321 CILP2Q8IUL8 1156 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 NOA1Q8NC60 698 aaKnown RBP22.18■■□□□ 1.14
SKP1-206ENST00000519321 SLC37A2Q8TED4 501 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 PATE1Q8WXA2 126 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 CCDC74AQ96AQ1 378 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 PWWP2AQ96N64 755 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 CARD6Q9BX69 1037 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 SARS2Q9NP81 518 aaKnown RBP22.18■■□□□ 1.14
SKP1-206ENST00000519321 FAM114A2Q9NRY5 505 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 INTS10Q9NVR2 710 aaKnown RBP22.18■■□□□ 1.14
SKP1-206ENST00000519321 GNPTGQ9UJJ9 305 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 CHMP2BQ9UQN3 213 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 PRSS21Q9Y6M0 314 aa22.18■■□□□ 1.14
SKP1-206ENST00000519321 RNF215Q9Y6U7 377 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms